RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF90Q03938 601 aa10.74□□□□□ -0.69
HDAC6-236ENST00000498808 LHFPL1Q86WI0 220 aa10.74□□□□□ -0.69
HDAC6-236ENST00000498808 RXFP4Q8TDU9 374 aa10.74□□□□□ -0.69
HDAC6-236ENST00000498808 ZNF503Q96F45 646 aa10.74□□□□□ -0.69
HDAC6-236ENST00000498808 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
HDAC6-236ENST00000498808 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-236ENST00000498808 IGKV1D-37A0A075B6S9 117 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 LYZP61626 148 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 OR5I1Q13606 314 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 NMSQ5H8A3 153 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 OR8I2Q8N0Y5 310 aa10.73□□□□□ -0.69
HDAC6-236ENST00000498808 A0A0J9YY99 117 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 M6PRP20645 277 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 TGFBR1P36897 503 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 KLF9Q13886 244 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-236ENST00000498808 ICAM4Q14773 271 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 FAM219AQ8IW50 185 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 LHFPL5Q8TAF8 219 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 CACNG5Q9UF02 275 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 TIMM8BQ9Y5J9 83 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-236ENST00000498808 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
HDAC6-236ENST00000498808 ZFP92A6NM28 416 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 ZNF701M0R085 212 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-236ENST00000498808 DUSP14O95147 198 aaKnown RBP10.71□□□□□ -0.69
HDAC6-236ENST00000498808 HOXA5P20719 270 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 MEOX2P50222 304 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 HAMPP81172 84 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 IZUMO2Q6UXV1 221 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 Q6ZSN1 163 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 GPR141Q7Z602 305 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 SNX29P2Q8IUI4 249 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 LINC01587Q99440 93 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 SLC25A32Q9H2D1 315 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
HDAC6-236ENST00000498808 COPZ2Q9P299 210 aa10.71□□□□□ -0.69
HDAC6-236ENST00000498808 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 EREGO14944 169 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 CDS2O95674 445 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 DNAH10OSP0CZ25 163 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 TAS2R60P59551 318 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 IGFL4Q6B9Z1 124 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 CROCCP3Q8IVE0 287 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 PPP1R14BQ96C90 147 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 C16orf74Q96GX8 76 aa10.7□□□□□ -0.7
HDAC6-236ENST00000498808 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-236ENST00000498808 BOLA2-SMG1P6H3BVE0 249 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 HTN1P15515 57 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 OR2F1Q13607 317 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 MEF2DQ14814 521 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 ARRDC1Q8N5I2 433 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 LINC00612Q8N6U2 182 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 CCDC71LQ8N9Z2 235 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 OR10J6PQ8NGY7 276 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
HDAC6-236ENST00000498808 GLYATL2Q8WU03 294 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 TMEM222Q9H0R3 208 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 TNFRSF18Q9Y5U5 241 aa10.69□□□□□ -0.7
HDAC6-236ENST00000498808 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 SNRPGP15A8MWD9 76 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 ANKRD65E5RJM6 399 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 IFNA5P01569 189 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 OR5AC1P0C628 307 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
HDAC6-236ENST00000498808 GALR1P47211 349 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 GAMTQ14353 236 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 TMEM144Q7Z5S9 345 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 SELENOHQ8IZQ5 122 aaKnown RBP10.68□□□□□ -0.7
HDAC6-236ENST00000498808 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 RNF182Q8N6D2 247 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 OR13C8Q8NGS7 320 aa10.68□□□□□ -0.7
HDAC6-236ENST00000498808 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
HDAC6-236ENST00000498808 A0A087WTM6 91 aa10.67□□□□□ -0.7
HDAC6-236ENST00000498808 H3BNG1 76 aa10.67□□□□□ -0.7
HDAC6-236ENST00000498808 B3GALNT1O75752 331 aa10.67□□□□□ -0.7
HDAC6-236ENST00000498808 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
HDAC6-236ENST00000498808 RNASE10Q5GAN6 216 aaKnown RBP10.67□□□□□ -0.7
HDAC6-236ENST00000498808 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
HDAC6-236ENST00000498808 SLC25A22Q9H936 323 aa10.67□□□□□ -0.7
HDAC6-236ENST00000498808 CD3DP04234 171 aa10.66□□□□□ -0.7
HDAC6-236ENST00000498808 ZNF493Q6ZR52 646 aa10.66□□□□□ -0.7
HDAC6-236ENST00000498808 ZFAND1Q8TCF1 268 aa10.66□□□□□ -0.7
HDAC6-236ENST00000498808 SLC35E1Q96K37 410 aa10.66□□□□□ -0.7
HDAC6-236ENST00000498808 U3KQ87 197 aa10.66□□□□□ -0.7
HDAC6-236ENST00000498808 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 A0A096LPF7 62 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 TEX13DA0A0J9YY54 714 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-236ENST00000498808 ZNF98A6NK75 572 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 SIVA1O15304 175 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 ZNF182P17025 639 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-236ENST00000498808 TMEM268Q5VZI3 342 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 LGI3Q8N145 548 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 OR4D10Q8NGI6 311 aa10.65□□□□□ -0.7
HDAC6-236ENST00000498808 MARCH1Q8TCQ1 289 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 232.3 ms