RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PPP1R14BQ96C90 147 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 HYLS1Q96M11 299 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 NPCDR1Q9BY65 106 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 PARD6GQ9BYG4 376 aaPredicted RBP15.17■□□□□ 0.02
CTSD-206ENST00000497544 TMEM231Q9H6L2 316 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 CHEK1O14757 476 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 HYPMO75409 117 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 PLP1P60201 277 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 CD300CQ08708 224 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 ZNF345Q14585 488 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 DEFB114Q30KQ6 69 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 PXDC1Q5TGL8 231 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 KCNRGQ8N5I3 272 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 STPG3Q8N7X2 389 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 GRAMD2BQ96HH9 432 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 NEURL2Q9BR09 285 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 ARL6Q9H0F7 186 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 DOK5Q9P104 306 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 RYR2Q92736 4967 aa15.16■□□□□ 0.02
CTSD-206ENST00000497544 G3V4G9 280 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 IGLV1-51P01701 117 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 APOHP02749 345 aaPredicted RBP15.15■□□□□ 0.02
CTSD-206ENST00000497544 OR5G3P0C626 314 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 B2MP61769 119 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PRR20EP86478 221 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PRR20CP86479 221 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PRR20DP86480 221 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PRR20BP86481 221 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PRR20AP86496 221 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 SAMD5Q5TGI4 173 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 S100A7AQ86SG5 101 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 KCNIP2Q9NS61 270 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 SLC39A9Q9NUM3 307 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 MLXQ9UH92 298 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 PXMP4Q9Y6I8 212 aa15.15■□□□□ 0.02
CTSD-206ENST00000497544 IGHV3-66A0A0C4DH42 116 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 CXCL2P19875 107 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 ZFP69Q49AA0 526 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 ST8SIA2Q92186 375 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 RSG1Q9BU20 258 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 VSIRQ9H7M9 311 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 ZMAT5Q9UDW3 170 aaKnown RBP15.14■□□□□ 0.01
CTSD-206ENST00000497544 HIGD1AQ9Y241 93 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 SELENOKQ9Y6D0 94 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 U3KQE9 123 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 SORL1Q92673 2214 aa15.14■□□□□ 0.01
CTSD-206ENST00000497544 DNAH3Q8TD57 4116 aa15.13■□□□□ 0.01
CTSD-206ENST00000497544 JTBO76095 146 aa15.13■□□□□ 0.01
CTSD-206ENST00000497544 CD300EQ496F6 205 aaPredicted RBP15.13■□□□□ 0.01
CTSD-206ENST00000497544 RPL7L1Q6DKI1 246 aaKnown RBP15.13■□□□□ 0.01
CTSD-206ENST00000497544 LAMTOR1Q6IAA8 161 aa15.13■□□□□ 0.01
CTSD-206ENST00000497544 RBPMS2Q6ZRY4 209 aaKnown RBP15.13■□□□□ 0.01
CTSD-206ENST00000497544 OR2K2Q8NGT1 345 aa15.13■□□□□ 0.01
CTSD-206ENST00000497544 ARPC5LQ9BPX5 153 aa15.13■□□□□ 0.01
CTSD-206ENST00000497544 ELOA3CA0A087WX78 387 aaPredicted RBP15.12■□□□□ 0.01
CTSD-206ENST00000497544 KANTRA0A1W2PQU2 76 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 COX7A2P2O60397 106 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 PFDN1O60925 122 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 CD5P06127 495 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 KPRPQ5T749 579 aaPredicted RBP15.12■□□□□ 0.01
CTSD-206ENST00000497544 LCN12Q6JVE5 192 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 TMUB2Q71RG4 321 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 HSD17B11Q8NBQ5 300 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 OR1L4Q8NGR5 311 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 MRAPQ8TCY5 172 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 RNF2Q99496 336 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 ARV1Q9H2C2 271 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 DNAJC4Q9NNZ3 241 aa15.12■□□□□ 0.01
CTSD-206ENST00000497544 BUB3O43684 328 aa15.11■□□□□ 0.01
CTSD-206ENST00000497544 C16orf54Q6UWD8 224 aa15.11■□□□□ 0.01
CTSD-206ENST00000497544 PATE2Q6UY27 113 aa15.11■□□□□ 0.01
CTSD-206ENST00000497544 DYNC2H1Q8NCM8 4307 aaKnown RBP15.11■□□□□ 0.01
CTSD-206ENST00000497544 TRAV25A0A0B4J276 109 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 RPL11P62913 178 aaKnown RBP15.1■□□□□ 0.01
CTSD-206ENST00000497544 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
CTSD-206ENST00000497544 C10orf113Q5VZT2 155 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 TCF24Q7RTU0 167 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 PFDN5Q99471 154 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 SLC25A39Q9BZJ4 359 aaPredicted RBP15.1■□□□□ 0.01
CTSD-206ENST00000497544 RNF24Q9Y225 148 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 TIMM9Q9Y5J7 89 aa15.1■□□□□ 0.01
CTSD-206ENST00000497544 ZNF98A6NK75 572 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 ATP6V0CP27449 155 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 GUCA2BQ16661 112 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 FFAR4Q5NUL3 377 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 C1orf194Q5T5A4 169 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 LINC00305Q7Z4B0 112 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 TMEM61Q8N0U2 210 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 OR8I2Q8N0Y5 310 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 GATAD1Q8WUU5 269 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 TMEM37Q8WXS4 190 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 GNPNAT1Q96EK6 184 aaPredicted RBP15.09■□□□□ 0.01
CTSD-206ENST00000497544 UHRF2Q96PU4 802 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 SLC25A22Q9H936 323 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 CYTL1Q9NRR1 136 aa15.09■□□□□ 0.01
CTSD-206ENST00000497544 IGKV3-7A0A075B6H7 116 aa15.08■□□□□ 0
CTSD-206ENST00000497544 IZUMO1RA6ND01 250 aa15.08■□□□□ 0
CTSD-206ENST00000497544 BCL2L11O43521 198 aa15.08■□□□□ 0
CTSD-206ENST00000497544 EGFEM1PQ0D2K5 195 aa15.08■□□□□ 0
CTSD-206ENST00000497544 FAM90A2PQ658T7 463 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms