RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 DPF1Q92782 380 aa11.79□□□□□ -0.52
CHTOP-206ENST00000495554 LOC105371242A0A075B767 164 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 BRS3P32247 399 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 CX3CL1P78423 397 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 C19orf35Q6ZS72 473 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
CHTOP-206ENST00000495554 MRPL18Q9H0U6 180 aaKnown RBP11.78□□□□□ -0.52
CHTOP-206ENST00000495554 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 FCN1O00602 326 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 PEX7O00628 323 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 HYPMO75409 117 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 HTR1DP28221 377 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 IER3P46695 156 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 PLGLAQ15195 96 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 TPTE2P1Q5T6R2 138 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 GNB1LQ9BYB4 327 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
CHTOP-206ENST00000495554 M0QZ24 198 aa11.77□□□□□ -0.52
CHTOP-206ENST00000495554 PLP1P60201 277 aa11.77□□□□□ -0.52
CHTOP-206ENST00000495554 FXYD3Q14802 87 aa11.77□□□□□ -0.52
CHTOP-206ENST00000495554 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.52
CHTOP-206ENST00000495554 LINC00479Q96M42 142 aa11.77□□□□□ -0.52
CHTOP-206ENST00000495554 DPM3Q9P2X0 92 aa11.77□□□□□ -0.52
CHTOP-206ENST00000495554 TBL2Q9Y4P3 447 aaKnown RBP11.77□□□□□ -0.52
CHTOP-206ENST00000495554 TIMM23O14925 209 aa11.77□□□□□ -0.53
CHTOP-206ENST00000495554 MYCNOSP40205 109 aa11.77□□□□□ -0.53
CHTOP-206ENST00000495554 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
CHTOP-206ENST00000495554 LDLRAD2Q5SZI1 272 aa11.77□□□□□ -0.53
CHTOP-206ENST00000495554 DTX2Q86UW9 622 aa11.77□□□□□ -0.53
CHTOP-206ENST00000495554 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 A0A1B0GV72 72 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 MT-ND6P03923 174 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 RANP62826 216 aaKnown RBP11.76□□□□□ -0.53
CHTOP-206ENST00000495554 COX19Q49B96 90 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 TMEM256Q8N2U0 113 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 SNURFLB1AK76 121 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 M0R1W7 72 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 CEACAM3P40198 252 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 MMDQ15546 238 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 BAGE2Q86Y30 109 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
CHTOP-206ENST00000495554 CRISP2P16562 243 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 CRYBA4P53673 196 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 ITLN2Q8WWU7 325 aaPredicted RBP11.75□□□□□ -0.53
CHTOP-206ENST00000495554 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CHTOP-206ENST00000495554 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 GRIFINA4D1Z8 144 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
CHTOP-206ENST00000495554 CNIH1O95406 144 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 CITED1Q99966 193 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 EPDR1Q9UM22 224 aa11.75□□□□□ -0.53
CHTOP-206ENST00000495554 I3L2K1 104 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 FRMD6-AS1P0C7T7 363 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 NBR2O15453 112 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 PRTN3P24158 256 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 TMEM183BQ1AE95 376 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 PGPA6NDG6 321 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 NUPR1O60356 82 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 NDUFS7O75251 213 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 SLC25A5P05141 298 aaKnown RBP11.74□□□□□ -0.53
CHTOP-206ENST00000495554 GP9P14770 177 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 GNLYP22749 145 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 TCL1AP56279 114 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 UBE2G1P62253 170 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 CFHR4Q92496 578 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
CHTOP-206ENST00000495554 ASH1LQ9NR48 2969 aaKnown RBP11.73□□□□□ -0.53
CHTOP-206ENST00000495554 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 SPINK4O60575 86 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 PSG1P11464 419 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 Q0VG73 95 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 IQCJQ1A5X6 159 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 NPBQ8NG41 125 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 ESDP10768 282 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 CDKN1AP38936 164 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 GNG5P63218 68 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 TP53TG3Q9ULZ0 132 aa11.73□□□□□ -0.53
CHTOP-206ENST00000495554 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 NDUFA3O95167 84 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 SLC35B1P78383 322 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
CHTOP-206ENST00000495554 MED13LQ71F56 2210 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms