RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
SHISA5-216ENST00000494854 HELTA6NFD8 242 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 SRD5A1P18405 259 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 SAA4P35542 130 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 FXYD5Q96DB9 178 aa12.29□□□□□ -0.44
SHISA5-216ENST00000494854 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
SHISA5-216ENST00000494854 A0A1W2PPQ1 181 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
SHISA5-216ENST00000494854 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 PSG1P11464 419 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 TEX38Q6PEX7 206 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 LINC00518Q8N0U6 118 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
SHISA5-216ENST00000494854 TRAV20A0A0B4J274 112 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 K7EN84 100 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 NDPQ00604 133 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 TIGITQ495A1 244 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.44
SHISA5-216ENST00000494854 MDFIQ99750 246 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 HIF1ANQ9NWT6 349 aa12.27□□□□□ -0.44
SHISA5-216ENST00000494854 CUBNO60494 3623 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BKO60814 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BJP06899 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BOP23527 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 BRS3P32247 399 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BBP33778 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 GNG4P50150 75 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BDP58876 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BCP62807 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST2H2BEQ16778 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 CENPWQ5EE01 88 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BHQ93079 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 IMMP2LQ96T52 175 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BNQ99877 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 HIST1H2BMQ99879 126 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 C1RLQ9NZP8 487 aa12.27□□□□□ -0.45
SHISA5-216ENST00000494854 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 NPFFO15130 113 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 LYZP61626 148 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 KLF17Q5JT82 389 aaPredicted RBP12.26□□□□□ -0.45
SHISA5-216ENST00000494854 TTC9CQ8N5M4 171 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 Q8N9W7 124 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 FRZBQ92765 325 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 HIGD1AQ9Y241 93 aa12.26□□□□□ -0.45
SHISA5-216ENST00000494854 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 PHOX2AO14813 284 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 IGKV1-17P01599 117 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 FAM3BP58499 235 aaPredicted RBP12.25□□□□□ -0.45
SHISA5-216ENST00000494854 IL17RELQ6ZVW7 336 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 CENPVL3A0A0U1RRI6 287 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 FABP1P07148 127 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 TRGC1P0CF51 173 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 NDUFA6P56556 154 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 PAX8Q06710 450 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 FOXL1Q12952 345 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 ZNF329Q86UD4 541 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
SHISA5-216ENST00000494854 TYMSP04818 313 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
SHISA5-216ENST00000494854 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 GP9P14770 177 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 GATA3P23771 443 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 TEX29Q8N6K0 151 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 SGMS2Q8NHU3 365 aa12.24□□□□□ -0.45
SHISA5-216ENST00000494854 HLA-DRB1P01911 266 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 MYCNOSP40205 109 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 OR5I1Q13606 314 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 BLNKQ8WV28 456 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 IGF2BP2-AS1Q96M15 143 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 J3QLI3 93 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 NBEAP1P0C6P0 100 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
SHISA5-216ENST00000494854 HOXA5P20719 270 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 TAS2R60P59551 318 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 RANP62826 216 aaKnown RBP12.23□□□□□ -0.45
SHISA5-216ENST00000494854 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 SPATA3Q8NHX4 192 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 TCEAL7Q9BRU2 100 aa12.23□□□□□ -0.45
SHISA5-216ENST00000494854 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
SHISA5-216ENST00000494854 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
SHISA5-216ENST00000494854 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
SHISA5-216ENST00000494854 PEX7O00628 323 aa12.22□□□□□ -0.45
SHISA5-216ENST00000494854 TOMM40O96008 361 aa12.22□□□□□ -0.45
SHISA5-216ENST00000494854 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
SHISA5-216ENST00000494854 MFAP4P55083 255 aa12.22□□□□□ -0.45
SHISA5-216ENST00000494854 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
SHISA5-216ENST00000494854 ZNF48Q96MX3 618 aaPredicted RBP12.22□□□□□ -0.45
SHISA5-216ENST00000494854 THYN1Q9P016 225 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms