RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ACOT6Q3I5F7 207 aaPredicted RBP14.79□□□□□ -0.04
USP39-218ENST00000493829 C10orf113Q5VZT2 155 aa14.79□□□□□ -0.04
USP39-218ENST00000493829 SPATA31B1PQ5VZV4 182 aa14.79□□□□□ -0.04
USP39-218ENST00000493829 LEMD1Q68G75 181 aa14.79□□□□□ -0.04
USP39-218ENST00000493829 OR4F17Q8NGA8 305 aa14.79□□□□□ -0.04
USP39-218ENST00000493829 OR4F4Q96R69 305 aa14.79□□□□□ -0.04
USP39-218ENST00000493829 APOHP02749 345 aaPredicted RBP14.78□□□□□ -0.04
USP39-218ENST00000493829 FHITP49789 147 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 TMEM41BQ5BJD5 291 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 MORN5Q5VZ52 161 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 EIF5AL1Q6IS14 154 aaKnown RBP14.78□□□□□ -0.04
USP39-218ENST00000493829 REC114Q7Z4M0 266 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 OR10G4Q8NGN3 311 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 OR10G9Q8NGN4 311 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 OR10G7Q8NGN6 311 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 OR1L4Q8NGR5 311 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 METTL26Q96S19 204 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 SCRT1Q9BWW7 348 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 SLC25A22Q9H936 323 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 DAZ1Q9NQZ3 744 aaKnown RBP14.78□□□□□ -0.04
USP39-218ENST00000493829 UFC1Q9Y3C8 167 aa14.78□□□□□ -0.04
USP39-218ENST00000493829 M6PRP20645 277 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 PLP1P60201 277 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 FAM78BQ5VT40 261 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 LINC00305Q7Z4B0 112 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 PFDN5Q99471 154 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 DNAJC4Q9NNZ3 241 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 RPRMQ9NS64 109 aa14.77□□□□□ -0.04
USP39-218ENST00000493829 TMEM213A2RRL7 107 aa14.77□□□□□ -0.05
USP39-218ENST00000493829 HMGB3O15347 200 aaKnown RBP14.77□□□□□ -0.05
USP39-218ENST00000493829 TEX261Q6UWH6 196 aa14.77□□□□□ -0.05
USP39-218ENST00000493829 OR9G4Q8NGQ1 327 aa14.77□□□□□ -0.05
USP39-218ENST00000493829 FAM213BQ8TBF2 198 aa14.77□□□□□ -0.05
USP39-218ENST00000493829 SEPSECSQ9HD40 501 aaKnown RBP14.77□□□□□ -0.05
USP39-218ENST00000493829 MRPL27Q9P0M9 148 aaKnown RBP14.77□□□□□ -0.05
USP39-218ENST00000493829 LGALS9O00182 355 aa14.76□□□□□ -0.05
USP39-218ENST00000493829 NPPCP23582 126 aa14.76□□□□□ -0.05
USP39-218ENST00000493829 PXDC1Q5TGL8 231 aa14.76□□□□□ -0.05
USP39-218ENST00000493829 MIR17HGQ75NE6 70 aa14.76□□□□□ -0.05
USP39-218ENST00000493829 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
USP39-218ENST00000493829 SLC25A39Q9BZJ4 359 aaPredicted RBP14.76□□□□□ -0.05
USP39-218ENST00000493829 ELOA3CA0A087WX78 387 aaPredicted RBP14.75□□□□□ -0.05
USP39-218ENST00000493829 TRAV5A0A0B4J249 113 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 A8MWP6 167 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 OVOL1O14753 267 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 MBP02144 154 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 SSX7Q7RTT5 188 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 RPP25LQ8N5L8 163 aaKnown RBP14.75□□□□□ -0.05
USP39-218ENST00000493829 SPATA3Q8NHX4 192 aa14.75□□□□□ -0.05
USP39-218ENST00000493829 A0A1W2PPV4 95 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 C2orf70A6NJV1 201 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 H3BRN7 92 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 LINC00482Q8N8I6 264 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 ZNF680Q8NEM1 530 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 GATAD1Q8WUU5 269 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 PEMTQ9UBM1 199 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 IGHV7-4-1A0A0J9YVY3 117 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 UMAD1C9J7I0 102 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 M0QZ24 198 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 CRYBB3P26998 211 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 CDC34P49427 236 aaPredicted RBP14.74□□□□□ -0.05
USP39-218ENST00000493829 RHOBP62745 196 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 ZNF726P1Q15940 193 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 PCNPQ8WW12 178 aaKnown RBP14.74□□□□□ -0.05
USP39-218ENST00000493829 SHANK2-AS3Q9BTD1 123 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 FUT9Q9Y231 359 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 WNK1Q9H4A3 2382 aa14.74□□□□□ -0.05
USP39-218ENST00000493829 A0A1B0GV50 99 aa14.73□□□□□ -0.05
USP39-218ENST00000493829 SULT1A2P50226 295 aa14.73□□□□□ -0.05
USP39-218ENST00000493829 IFITM2Q01629 132 aa14.73□□□□□ -0.05
USP39-218ENST00000493829 NARS2Q96I59 477 aaKnown RBP14.73□□□□□ -0.05
USP39-218ENST00000493829 ELOVL1Q9BW60 279 aa14.73□□□□□ -0.05
USP39-218ENST00000493829 ZNF98A6NK75 572 aa14.72□□□□□ -0.05
USP39-218ENST00000493829 K7EMT4 169 aa14.72□□□□□ -0.05
USP39-218ENST00000493829 IFNA7P01567 189 aa14.72□□□□□ -0.05
USP39-218ENST00000493829 FOLR2P14207 255 aa14.72□□□□□ -0.05
USP39-218ENST00000493829 RHPN1-AS1Q9BWJ2 59 aa14.72□□□□□ -0.05
USP39-218ENST00000493829 ACTR3CQ9C0K3 210 aaPredicted RBP14.72□□□□□ -0.05
USP39-218ENST00000493829 ZNF705EA8MWA4 302 aaPredicted RBP14.71□□□□□ -0.05
USP39-218ENST00000493829 SNRPCP09234 159 aaKnown RBP14.71□□□□□ -0.05
USP39-218ENST00000493829 CBLN1P23435 193 aa14.71□□□□□ -0.05
USP39-218ENST00000493829 ADAMTSL5Q6ZMM2 481 aa14.71□□□□□ -0.05
USP39-218ENST00000493829 RAB24Q969Q5 203 aa14.71□□□□□ -0.05
USP39-218ENST00000493829 MRPL32Q9BYC8 188 aaKnown RBP14.71□□□□□ -0.05
USP39-218ENST00000493829 UBQLN2Q9UHD9 624 aa14.71□□□□□ -0.05
USP39-218ENST00000493829 SMPXQ9UHP9 88 aa14.71□□□□□ -0.05
USP39-218ENST00000493829 CSN3P07498 182 aa14.71□□□□□ -0.06
USP39-218ENST00000493829 FGF8P55075 233 aaPredicted RBP14.71□□□□□ -0.06
USP39-218ENST00000493829 LCN15Q6UWW0 184 aa14.71□□□□□ -0.06
USP39-218ENST00000493829 IL34Q6ZMJ4 242 aa14.71□□□□□ -0.06
USP39-218ENST00000493829 RNF2Q99496 336 aa14.71□□□□□ -0.06
USP39-218ENST00000493829 SLC25A2Q9BXI2 301 aa14.71□□□□□ -0.06
USP39-218ENST00000493829 VWFP04275 2813 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 SEC14L6B5MCN3 397 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 CHEK1O14757 476 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 BUB3O43684 328 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 IQCF2Q8IXL9 164 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 OR8I2Q8N0Y5 310 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 RNF141Q8WVD5 230 aa14.7□□□□□ -0.06
USP39-218ENST00000493829 U3KQE9 123 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms