RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 CYTL1Q9NRR1 136 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 SLC39A9Q9NUM3 307 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 PXMP4Q9Y6I8 212 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 MEGF8Q7Z7M0 2845 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 A0A1W2PS18 150 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 CD5P06127 495 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 LYZP61626 148 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 LAMTOR1Q6IAA8 161 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 BAP18Q8IXM2 172 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 HSD17B11Q8NBQ5 300 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 OR2G3Q8NGZ4 309 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 GRAMD2BQ96HH9 432 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 RNF2Q99496 336 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 GPR61Q9BZJ8 451 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 MRPL27Q9P0M9 148 aaKnown RBP9.5□□□□□ -0.89
SNX17-208ENST00000493711 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
SNX17-208ENST00000493711 COX7A2P2O60397 106 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 CRYBB3P26998 211 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 ATP6V0CP27449 155 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 ACOT6Q3I5F7 207 aaPredicted RBP9.49□□□□□ -0.89
SNX17-208ENST00000493711 MIC13Q5XKP0 118 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 PBDC1Q9BVG4 233 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
SNX17-208ENST00000493711 OR5G3P0C626 314 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 SEC11BP0C7V7 166 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 ORM2P19652 201 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 INSL3P51460 131 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
SNX17-208ENST00000493711 C1orf194Q5T5A4 169 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 UNQ9165/PRO28630Q6UXU0 137 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
SNX17-208ENST00000493711 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
SNX17-208ENST00000493711 TECRQ9NZ01 308 aaKnown RBP9.48□□□□□ -0.89
SNX17-208ENST00000493711 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 C2orf70A6NJV1 201 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 BOLA2-SMG1P6H3BVE0 249 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 SPP1P10451 314 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 M6PRP20645 277 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 GATA2P23769 480 aaPredicted RBP9.47□□□□□ -0.89
SNX17-208ENST00000493711 USF2Q15853 346 aaPredicted RBP9.47□□□□□ -0.89
SNX17-208ENST00000493711 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
SNX17-208ENST00000493711 PHYHIPLQ96FC7 376 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 ZNF414Q96IQ9 312 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 GPR82Q96P67 336 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
SNX17-208ENST00000493711 TMEM213A2RRL7 107 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 CBLN1P23435 193 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 RHOBP62745 196 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 OR2K2Q8NGT1 345 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
SNX17-208ENST00000493711 VSIRQ9H7M9 311 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 U3KQE9 123 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.9
SNX17-208ENST00000493711 HELTA6NFD8 242 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 CSN3P07498 182 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 FOLR2P14207 255 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 RAB5CP51148 216 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 DPPA3Q6W0C5 159 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 LINC00305Q7Z4B0 112 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 SLC25A39Q9BZJ4 359 aaPredicted RBP9.45□□□□□ -0.9
SNX17-208ENST00000493711 DOK5Q9P104 306 aa9.45□□□□□ -0.9
SNX17-208ENST00000493711 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
SNX17-208ENST00000493711 IGHV3OR16-8A0A075B7F1 116 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 SEC14L6B5MCN3 397 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 H3BRN7 92 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 CHEK1O14757 476 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
SNX17-208ENST00000493711 BUB3O43684 328 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 SAP30O75446 220 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 TAS2R45P59539 299 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 PATE2Q6UY27 113 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 OR10G4Q8NGN3 311 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 OR10G9Q8NGN4 311 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms