RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 LINC00299Q6ZSB3 139 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 TMEM144Q7Z5S9 345 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
SEC13-218ENST00000490283 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 MGAT4CQ9UBM8 478 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 IL5P05113 134 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 C4BPBP20851 252 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 PSMB3P49720 205 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 TAS2R30P59541 319 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 OR10P1Q8NGE3 313 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 OR1B1Q8NGR6 318 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 GPR82Q96P67 336 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 SLC25A22Q9H936 323 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
SEC13-218ENST00000490283 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 L7N2F9 121 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 TSC22D2O75157 780 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 METTL15P1P0C7V9 234 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 MIFP14174 115 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 SELENOTP62341 195 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 VAMP2P63027 116 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 DLK1P80370 383 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 MZT2BQ6NZ67 158 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 CYP2G1PQ6ZSU1 146 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
SEC13-218ENST00000490283 TBC1D24Q9ULP9 559 aa12.72□□□□□ -0.37
SEC13-218ENST00000490283 FAM240BA0A1B0GVZ2 78 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 H3BMM0 161 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 ISLRO14498 428 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 DEFB4AO15263 64 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 GIG44P09565 113 aaPredicted RBP12.71□□□□□ -0.37
SEC13-218ENST00000490283 HLA-DRB4P13762 266 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 RAP2BP61225 183 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 RRAS2P62070 204 aaPredicted RBP12.71□□□□□ -0.37
SEC13-218ENST00000490283 TMEM14EPQ6UXP3 125 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
SEC13-218ENST00000490283 C16orf92Q96LL3 132 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.37
SEC13-218ENST00000490283 CLEC5AQ9NY25 188 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.37
SEC13-218ENST00000490283 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 ZNF98A6NK75 572 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 CCSO14618 274 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
SEC13-218ENST00000490283 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
SEC13-218ENST00000490283 SPATA31B1PQ5VZV4 182 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 NPVFQ9HCQ7 196 aa12.7□□□□□ -0.38
SEC13-218ENST00000490283 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 ZNF705EA8MWA4 302 aaPredicted RBP12.69□□□□□ -0.38
SEC13-218ENST00000490283 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
SEC13-218ENST00000490283 PAX9P55771 341 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
SEC13-218ENST00000490283 Q8NAQ8 132 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 LINC00476Q8WZB0 136 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 SEC22CQ9BRL7 303 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 SAV1Q9H4B6 383 aaPredicted RBP12.69□□□□□ -0.38
SEC13-218ENST00000490283 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 DOK5Q9P104 306 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 XCL2Q9UBD3 114 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 RNF24Q9Y225 148 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 HIGD1AQ9Y241 93 aa12.69□□□□□ -0.38
SEC13-218ENST00000490283 RCL1Q9Y2P8 373 aaKnown RBP12.69□□□□□ -0.38
SEC13-218ENST00000490283 PMS2P5A8MQ11 134 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 SOCS3O14543 225 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 HYPMO75409 117 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 LY6G6CO95867 125 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 IGKV3-20P01619 116 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 OR5G3P0C626 314 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 LINC00869P0C866 280 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 PVALBP20472 110 aaPredicted RBP12.68□□□□□ -0.38
SEC13-218ENST00000490283 BCAP31P51572 246 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 OR4B1Q8NGF8 309 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 RSG1Q9BU20 258 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 GGACTQ9BVM4 153 aa12.68□□□□□ -0.38
SEC13-218ENST00000490283 LSM5Q9Y4Y9 91 aaKnown RBP12.68□□□□□ -0.38
SEC13-218ENST00000490283 C7orf66A4D0T2 115 aa12.67□□□□□ -0.38
SEC13-218ENST00000490283 CCNKO75909 580 aa12.67□□□□□ -0.38
SEC13-218ENST00000490283 TMEM182Q6ZP80 229 aaPredicted RBP12.67□□□□□ -0.38
SEC13-218ENST00000490283 LYSTQ99698 3801 aa12.67□□□□□ -0.38
SEC13-218ENST00000490283 SLC25A39Q9BZJ4 359 aaPredicted RBP12.67□□□□□ -0.38
SEC13-218ENST00000490283 HRH4Q9H3N8 390 aa12.67□□□□□ -0.38
SEC13-218ENST00000490283 RYR2Q92736 4967 aa12.67□□□□□ -0.38
SEC13-218ENST00000490283 H3BRN7 92 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 GOSR2O14653 212 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
SEC13-218ENST00000490283 CAV2P51636 162 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 GSG1LQ6UXU4 331 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 ZNF546Q86UE3 836 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 CSNK1G2-AS1Q8NCQ2 148 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 ENKURQ8TC29 256 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms