RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TAAR3PQ9P1P4 343 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 SSR3Q9UNL2 185 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 HELZ2Q9BYK8 2649 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 OR5H14A6NHG9 310 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 H7C1C5 153 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF324O75467 553 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 PGLYRP1O75594 196 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 CDRT1O95170 752 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 HLA-DQA1P01909 254 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 C8GP07360 202 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 GPX2P18283 190 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 BLVRBP30043 206 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 OPRK1P41145 380 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 LCN6P62502 163 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 ENDOGQ14249 297 aaKnown RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 SAXO1Q8IYX7 474 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF433Q8N7K0 673 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 OR4K13Q8NH42 304 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 THEM6Q8WUY1 208 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 NMNAT3Q96T66 252 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 SERPINI1Q99574 410 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 CGREF1Q99674 301 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 CHCHD7Q9BUK0 85 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 OR2D2Q9H210 308 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 C16orf95Q9H693 158 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 FAM60AQ9NP50 221 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 NUBP2Q9Y5Y2 271 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 GCN1Q92616 2671 aaKnown RBP2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 DSCAML1Q8TD84 2053 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 SDK2Q58EX2 2172 aa2.03□□□□□ -2.08
DEPDC1-204ENST00000489862 DSCAMO60469 2012 aa2.03□□□□□ -2.09
DEPDC1-204ENST00000489862 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A096LNJ9 63 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 IGHV1-69-2A0A0G2JMI3 117 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A1W2PP18 115 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TMEM223A0PJW6 202 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TRAPPC2LH3BP13 241 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 H7BYZ3 331 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 RGS5O15539 181 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GSTZ1O43708 216 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GABRA2P47869 451 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF80P51504 273 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 PLPPR5Q32ZL2 321 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LGALS9CQ6DKI2 356 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 C5orf46Q6UWT4 87 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 C4orf22Q6V702 233 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 Q6ZS49 121 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 DAND5Q8N907 189 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 OR4E2Q8NGC2 313 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LINC01560Q8TB33 94 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 STARD4Q96DR4 205 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 PHYHIPLQ96FC7 376 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 PFDN5Q99471 154 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TTTY13Q9BZ97 58 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 WDR61Q9GZS3 305 aaKnown RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 HMG20AQ9NP66 347 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GPR84Q9NQS5 396 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 KCNIP2Q9NS61 270 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 MED11Q9P086 117 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TRAPPC2LQ9UL33 140 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 FIS1Q9Y3D6 152 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 MED13Q9UHV7 2174 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 FASNP49327 2511 aaKnown RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF462Q96JM2 2506 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 CCDC88CQ9P219 2028 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 NBASA2RRP1 2371 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 MDFIC2A0A1B0GVS7 189 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LINC00862A6NCI5 91 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 A6NED7 52 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 A8MUU9 505 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 A8MWL6 223 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 C1QCP02747 245 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 SHBGP04278 402 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 HTR1AP08908 422 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 ADRA2AP08913 450 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 NTF3P20783 257 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 SERPINB10P48595 397 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 INSL3P51460 131 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 EMP1P54849 157 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 NDPQ00604 133 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 OR8B8Q15620 311 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GRK1Q15835 563 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 C3orf62Q6ZUJ4 267 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 SPATA12Q7Z6I5 190 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GKN2Q86XP6 184 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF615Q8N8J6 731 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 OR5C1Q8NGR4 320 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 FNDC9Q8TBE3 224 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 DCANP1Q8TF63 244 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LZICQ8WZA0 190 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GPR146Q96CH1 333 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 CMBLQ96DG6 245 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 NARS2Q96I59 477 aaKnown RBP2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GPER1Q99527 375 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms