RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 C7orf71A4D174 169 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 LEPROTO15243 131 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 HRASP01112 189 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 KRASP01116 189 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H1DP16402 221 aaKnown RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF93P35789 620 aaPredicted RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 FOXA3P55318 350 aaPredicted RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 TPPP2P59282 170 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 RPL18Q07020 188 aaKnown RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 DIAPH2-AS1Q14236 149 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 SPATA12Q7Z6I5 190 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 C4orf33Q8N1A6 199 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 OR5H6Q8NGV6 325 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 WFDC5Q8TCV5 224 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 NAT14Q8WUY8 206 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 SNHG12Q9BXW3 62 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 MRPL32Q9BYC8 188 aaKnown RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF586Q9NXT0 402 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 CCDC18Q5T9S5 1454 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 DOCK4Q8N1I0 1966 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 KDM5CP41229 1560 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 BRWD3Q6RI45 1802 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 SBF1O95248 1867 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 BCORL1Q5H9F3 1711 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 A0A0G2JMM0 328 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 A0A1W2PPB8 328 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 A6NED7 52 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 KIR3DP1A8MWS1 328 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 K7ERJ3 54 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 RTL8CO15255 209 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H2BKO60814 126 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 NDUFB2O95178 105 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 C1QAP02745 245 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 TCRAP04437 139 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H2BJP06899 126 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 CGB3P0DN86 165 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 CGB7P0DN87 165 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 CRHBPP24387 322 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 S100A10P60903 97 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 QRFPP83859 136 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HSD52Q0P140 79 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 FUT5Q11128 374 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 C22orf39Q6P5X5 142 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 IZUMO2Q6UXV1 221 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 RPS19BP1Q86WX3 136 aaKnown RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 BPIFA4PQ86YQ2 179 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HIST3H2BBQ8N257 126 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 C9orf62Q8N4C0 152 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 ZFAND2AQ8N6M9 145 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 ZFP62Q8NB50 900 aaPredicted RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 APCDD1LQ8NCL9 501 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 KLF14Q8TD94 323 aaPredicted RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 RBPMSQ93062 196 aaKnown RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 CIB3Q96Q77 187 aaPredicted RBP2.35□□□□□ -2.03
KDM3A-213ENST00000488971 SDF2Q99470 211 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H2BLQ99880 126 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 DUSP21Q9H596 190 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 OSTCQ9NRP0 149 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 PRO0461Q9UI25 63 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 EPDR1Q9UM22 224 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF835Q9Y2P0 537 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 THADAQ6YHU6 1953 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 NLRC5Q86WI3 1866 aa2.35□□□□□ -2.03
KDM3A-213ENST00000488971 NCKAP5O14513 1909 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 CEP164Q9UPV0 1460 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 SCN4AP35499 1836 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 TRGV10A0A0A0MS01 117 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 TRBV27A0A0K0K1C4 114 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 A8MWP6 167 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 CCDC179H3BU77 68 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 CDC42EP2O14613 210 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 MT-ND6P03923 174 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 SLC25A16P16260 332 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 RNASE4P34096 147 aaKnown RBP2.34□□□□□ -2.03
KDM3A-213ENST00000488971 AQP4P55087 323 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 TMEM258P61165 79 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 AKR1C1Q04828 323 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 EIF4EBP1Q13541 118 aaPredicted RBP2.34□□□□□ -2.03
KDM3A-213ENST00000488971 MIR17HGQ75NE6 70 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 PHF5AQ7RTV0 110 aaKnown RBP2.34□□□□□ -2.03
KDM3A-213ENST00000488971 GKN2Q86XP6 184 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 WFDC11Q8NEX6 87 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 OR10P1Q8NGE3 313 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 OR5D16Q8NGK9 328 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 PRELID3AQ96N28 172 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF714Q96N38 554 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 GINS4Q9BRT9 223 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 SNRNP25Q9BV90 132 aaKnown RBP2.34□□□□□ -2.03
KDM3A-213ENST00000488971 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
KDM3A-213ENST00000488971 TXNL4BQ9NX01 149 aaKnown RBP2.34□□□□□ -2.03
KDM3A-213ENST00000488971 SCP2D1Q9UJQ7 156 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms