RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
CPNE1-224ENST00000483359 SCGB1C1Q8TD33 95 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 VSIRQ9H7M9 311 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 PXMP4Q9Y6I8 212 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
CPNE1-224ENST00000483359 GUCA2BQ16661 112 aa13.44□□□□□ -0.26
CPNE1-224ENST00000483359 LCN12Q6JVE5 192 aa13.44□□□□□ -0.26
CPNE1-224ENST00000483359 PRR25Q96S07 402 aa13.44□□□□□ -0.26
CPNE1-224ENST00000483359 SLC25A22Q9H936 323 aa13.44□□□□□ -0.26
CPNE1-224ENST00000483359 A0A1W2PS18 150 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 BMI1P35226 326 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 PRR20EP86478 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 PRR20CP86479 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 PRR20DP86480 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 PRR20BP86481 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 PRR20AP86496 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 ZNF266Q14584 549 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 Q6ZRG5 221 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 TCF24Q7RTU0 167 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 TMEM231Q9H6L2 316 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 SLC39A9Q9NUM3 307 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 HMSDA8MTL9 139 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 BUB3O43684 328 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 HYPMO75409 117 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 RPL29P47914 159 aaKnown RBP13.43□□□□□ -0.26
CPNE1-224ENST00000483359 HSD17B11Q8NBQ5 300 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 GRAMD2BQ96HH9 432 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 ARV1Q9H2C2 271 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 HIGD1AQ9Y241 93 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-224ENST00000483359 U3KQE9 123 aa13.43□□□□□ -0.26
CPNE1-224ENST00000483359 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 CXCL2P19875 107 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 GCSAMLQ5JQS6 135 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-224ENST00000483359 RPL7L1Q6DKI1 246 aaKnown RBP13.42□□□□□ -0.26
CPNE1-224ENST00000483359 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 GBGT1Q8N5D6 347 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
CPNE1-224ENST00000483359 C17orf112F2Z3M2 114 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 C1QBP02746 253 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 GP9P14770 177 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 TFPI2P48307 235 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 PLP1P60201 277 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 LAMTOR1Q6IAA8 161 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 OR2K2Q8NGT1 345 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 SLC25A39Q9BZJ4 359 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-224ENST00000483359 ZNF345Q14585 488 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
CPNE1-224ENST00000483359 DNAH3Q8TD57 4116 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 C10orf113Q5VZT2 155 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 LINC00305Q7Z4B0 112 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 KCNRGQ8N5I3 272 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 GLMPQ8WWB7 406 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 NEURL2Q9BR09 285 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 PFDN2Q9UHV9 154 aa13.4□□□□□ -0.26
CPNE1-224ENST00000483359 ZNF98A6NK75 572 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 ZNF785A8K8V0 405 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 H3BRN7 92 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 SIGLEC15Q6ZMC9 328 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 WFDC3Q8IUB2 231 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 OR8I2Q8N0Y5 310 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 PARD6GQ9BYG4 376 aaPredicted RBP13.4□□□□□ -0.27
CPNE1-224ENST00000483359 KCNIP2Q9NS61 270 aa13.4□□□□□ -0.27
CPNE1-224ENST00000483359 AURKAIP1Q9NWT8 199 aaPredicted RBP13.4□□□□□ -0.27
CPNE1-224ENST00000483359 ZFP69Q49AA0 526 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 FFAR4Q5NUL3 377 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 ARPC5LQ9BPX5 153 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 SHANK2-AS3Q9BTD1 123 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 SH3BGRL3Q9H299 93 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 SORL1Q92673 2214 aa13.39□□□□□ -0.27
CPNE1-224ENST00000483359 BORCS7-ASMTA0A0B4J1R7 106 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 TSPAN4O14817 238 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 ELOA3CA0A087WX78 387 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-224ENST00000483359 TRAV25A0A0B4J276 109 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 PFDN1O60925 122 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 ATP6V0CP27449 155 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 HYLS1Q96M11 299 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 PFDN5Q99471 154 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-224ENST00000483359 MS4A6AQ9H2W1 248 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
CPNE1-224ENST00000483359 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
CPNE1-224ENST00000483359 MEGF8Q7Z7M0 2845 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 A0A0D9SG52 128 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 HELTA6NFD8 242 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 TAAR5O14804 337 aa13.37□□□□□ -0.27
CPNE1-224ENST00000483359 CD7P09564 240 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms