RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CLCC1Q96S66 551 aa4.41□□□□□ -1.7
CHD6-209ENST00000482596 AGMATQ9BSE5 352 aa4.41□□□□□ -1.7
CHD6-209ENST00000482596 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
CHD6-209ENST00000482596 SLC2A9Q9NRM0 540 aa4.41□□□□□ -1.7
CHD6-209ENST00000482596 OR1A1Q9P1Q5 309 aa4.41□□□□□ -1.7
CHD6-209ENST00000482596 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 TRBV6-7A0A0A0MS04 114 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 IGKV1-6A0A0C4DH72 117 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 C15orf61A6NNL5 157 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 H7C2Y5 167 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 MED6O75586 246 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CCNKO75909 580 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CT45A6P0DMU7 189 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CT45A5P0DMU8 189 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CT45A7P0DMV0 189 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 FGF8P55075 233 aaPredicted RBP4.4□□□□□ -1.71
CHD6-209ENST00000482596 RANP62826 216 aaKnown RBP4.4□□□□□ -1.71
CHD6-209ENST00000482596 CD300CQ08708 224 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CDNFQ49AH0 187 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 TMEM69Q5SWH9 247 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 FAM131AQ6UXB0 335 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 Q6ZS49 121 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 Q6ZSA8 131 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 TMEM17Q86X19 198 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 NPBQ8NG41 125 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 RNASEH2CQ8TDP1 164 aaKnown RBP4.4□□□□□ -1.71
CHD6-209ENST00000482596 ABHD14BQ96IU4 210 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 RNF5Q99942 180 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 SEC22CQ9BRL7 303 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 GINS4Q9BRT9 223 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 CABLES2Q9BTV7 478 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
CHD6-209ENST00000482596 DCSTAMPQ9H295 470 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 OR51M1Q9H341 326 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 ZNF230Q9UIE0 474 aaPredicted RBP4.4□□□□□ -1.71
CHD6-209ENST00000482596 WASHC3Q9Y3C0 194 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 ETV7Q9Y603 341 aa4.4□□□□□ -1.71
CHD6-209ENST00000482596 LINC00587B1AMM8 73 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 F8W036 122 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 H0YJW9 148 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 H3BUA1 57 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 PROP1O75360 226 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 APOA2P02652 100 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 C8orf88P0DMB2 117 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 DUTP33316 252 aaKnown RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 GNG2P59768 71 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 OR2B8PP59922 312 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 GAGE1Q13065 139 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 PDZD11Q5EBL8 140 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 MORN3Q6PF18 240 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 SCXQ7RTU7 201 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 PDPNQ86YL7 162 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 OR5H6Q8NGV6 325 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 RNASE11Q8TAA1 199 aaKnown RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 UHRF2Q96PU4 802 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 SDHCQ99643 169 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 OR2D2Q9H210 308 aa4.39□□□□□ -1.71
CHD6-209ENST00000482596 ZNF430Q9H8G1 570 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 ELF5Q9UKW6 265 aaPredicted RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 RBM7Q9Y580 266 aaKnown RBP4.39□□□□□ -1.71
CHD6-209ENST00000482596 IGKV1D-8A0A087WSZ0 117 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 RPS10-NUDT3A0A1W2PQS6 291 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 TMEM235A6NFC5 223 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 M0R1X1 148 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 SULT1C2O00338 296 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 RRHO14718 337 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 NUDT3O95989 172 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 CD5P06127 495 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 SCGB1A1P11684 91 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 ANXA3P12429 323 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 GNRHRP30968 328 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 TGFBR1P36897 503 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 HOXA1P49639 335 aaPredicted RBP4.38□□□□□ -1.71
CHD6-209ENST00000482596 CCL18P55774 89 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 LSM3P62310 102 aaKnown RBP4.38□□□□□ -1.71
CHD6-209ENST00000482596 RAB31Q13636 194 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 PLGLAQ15195 96 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 TRIQKQ629K1 86 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 CNIH2Q6PI25 160 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 S100A7AQ86SG5 101 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 H1FOOQ8IZA3 346 aaPredicted RBP4.38□□□□□ -1.71
CHD6-209ENST00000482596 LGI3Q8N145 548 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 GBGT1Q8N5D6 347 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 ZNF383Q8NA42 475 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 DMBX1Q8NFW5 382 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 GRPEL2Q8TAA5 225 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 SLC25A38Q96DW6 304 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 S100A16Q96FQ6 103 aaKnown RBP4.38□□□□□ -1.71
CHD6-209ENST00000482596 GRAMD2BQ96HH9 432 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 TSNAXQ99598 290 aaKnown RBP4.38□□□□□ -1.71
CHD6-209ENST00000482596 SDHAF2Q9NX18 166 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
CHD6-209ENST00000482596 TEX13DA0A0J9YY54 714 aaPredicted RBP4.37□□□□□ -1.71
CHD6-209ENST00000482596 A8MWP6 167 aa4.37□□□□□ -1.71
CHD6-209ENST00000482596 DISC1C4P0D8 188 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms