RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 C7orf71A4D174 169 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 SH2D7A6NKC9 451 aaPredicted RBP11.46□□□□□ -0.57
NR1H3-220ENST00000481020 CD59P13987 128 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 LGALS9BQ3B8N2 356 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 LGALS9CQ6DKI2 356 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 LINC00173Q6ZV60 143 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 FA2HQ7L5A8 372 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 ASCL5Q7RTU5 278 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 S100A7AQ86SG5 101 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 TNFRSF14Q92956 283 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
NR1H3-220ENST00000481020 COL25A1Q9BXS0 654 aaPredicted RBP11.46□□□□□ -0.57
NR1H3-220ENST00000481020 CSTL1Q9H114 145 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 CACNA1GO43497 2377 aa11.46□□□□□ -0.57
NR1H3-220ENST00000481020 A0A1W2PPI3 338 aa11.46□□□□□ -0.58
NR1H3-220ENST00000481020 E7EUB6 86 aa11.46□□□□□ -0.58
NR1H3-220ENST00000481020 C2orf91Q6ZV80 131 aa11.46□□□□□ -0.58
NR1H3-220ENST00000481020 AP1S3Q96PC3 154 aa11.46□□□□□ -0.58
NR1H3-220ENST00000481020 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.58
NR1H3-220ENST00000481020 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 DOCK7Q96N67 2140 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 THBDP07204 575 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 FAM201AQ5SY85 155 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
NR1H3-220ENST00000481020 OR4X2Q8NGF9 303 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 U3KQK5 164 aa11.45□□□□□ -0.58
NR1H3-220ENST00000481020 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
NR1H3-220ENST00000481020 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 OVOL3O00110 214 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 IGLV2-11P01706 119 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 HSD52Q0P140 79 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
NR1H3-220ENST00000481020 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
NR1H3-220ENST00000481020 CBY3A6NI87 242 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 M0QZ24 198 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 RPL27AP46776 148 aaKnown RBP11.43□□□□□ -0.58
NR1H3-220ENST00000481020 RBPJQ06330 500 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 BOD1L2Q8IYS8 172 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 CIARTQ8N365 385 aaPredicted RBP11.43□□□□□ -0.58
NR1H3-220ENST00000481020 DEFB108BQ8NET1 73 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 PRSS3P2Q8NHM4 247 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 A0A087X0K7 114 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 CDX4O14627 284 aaPredicted RBP11.43□□□□□ -0.58
NR1H3-220ENST00000481020 PLAUP00749 431 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 FGF6P10767 208 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 TMEM200BQ69YZ2 307 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
NR1H3-220ENST00000481020 GPR179Q6PRD1 2367 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 K7EM74 188 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 SMIM17P0DL12 118 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 APOBEC3AP31941 199 aaPredicted RBP11.42□□□□□ -0.58
NR1H3-220ENST00000481020 HES3Q5TGS1 186 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 ASPHD1Q5U4P2 390 aa11.42□□□□□ -0.58
NR1H3-220ENST00000481020 F11RQ9Y624 299 aaKnown RBP11.42□□□□□ -0.58
NR1H3-220ENST00000481020 SLC25A17O43808 307 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 CRYGBP07316 175 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 MRGPRG-AS1Q2M3A8 158 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 VHLLQ6RSH7 139 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
NR1H3-220ENST00000481020 COX8CQ7Z4L0 72 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 RNF5Q99942 180 aa11.41□□□□□ -0.58
NR1H3-220ENST00000481020 SLC25A39Q9BZJ4 359 aaPredicted RBP11.41□□□□□ -0.58
NR1H3-220ENST00000481020 K7EP34 96 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 NDUFB3O43676 98 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 PDE6HQ13956 83 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 SRSF12Q8WXF0 261 aaKnown RBP11.4□□□□□ -0.58
NR1H3-220ENST00000481020 KAAG1Q9UBP8 84 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 DMDP11532 3685 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 TRBV19A0A075B6N1 114 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
NR1H3-220ENST00000481020 CCL11P51671 97 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 PSG3Q16557 428 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 PRNTQ86SH4 94 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 FER1L6-AS1Q8NA97 138 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 NGBQ9NPG2 151 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 ZNRD1Q9P1U0 126 aa11.4□□□□□ -0.58
NR1H3-220ENST00000481020 MYO15AQ9UKN7 3530 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 PPIAL4EA0A075B759 164 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 A1L4Q6 167 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 PPIAL4DF5H284 164 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
NR1H3-220ENST00000481020 PPIAL4FP0DN26 164 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 CD40P25942 277 aa11.39□□□□□ -0.59
NR1H3-220ENST00000481020 PLGLAQ15195 96 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms