RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 LINC00322Q6ZN03 302 aaPredicted RBP4.05□□□□□ -1.76
SSR3-207ENST00000478842 IDO2Q6ZQW0 420 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 ZNF818PQ6ZRF7 136 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 C14orf178Q8N769 122 aaPredicted RBP4.05□□□□□ -1.76
SSR3-207ENST00000478842 ZNF645Q8N7E2 425 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 Q8N9W7 124 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.05□□□□□ -1.76
SSR3-207ENST00000478842 DUSP18Q8NEJ0 188 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 OR2T10Q8NGZ9 312 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 OR10J5Q8NHC4 309 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 TERB2Q8NHR7 220 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 OR4C12Q96R67 309 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 PRRT1Q99946 306 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 RASL11BQ9BPW5 248 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 ZNF2Q9BSG1 426 aaPredicted RBP4.05□□□□□ -1.76
SSR3-207ENST00000478842 RTBDNQ9BSG5 229 aaPredicted RBP4.05□□□□□ -1.76
SSR3-207ENST00000478842 OR2D2Q9H210 308 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 PLSCR3Q9NRY6 295 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 SDHAF2Q9NX18 166 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
SSR3-207ENST00000478842 NUPR2A6NF83 97 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 ZFP92A6NM28 416 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 DISC1C4P0D8 188 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 H0Y980 276 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 HSD17B6O14756 317 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 IGHV3-7P01780 117 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 GAPDHP04406 335 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 CTSDP07339 412 aaPredicted RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 NFYBP25208 207 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 CD1BP29016 333 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 FAUP35544 74 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 CEACAM6P40199 344 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 GNG10P50151 68 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 RAB9AP51151 201 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 RPL30P62888 115 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 RPL39P5Q59GN2 51 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 HSD17B13Q7Z5P4 300 aaPredicted RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 RPP25LQ8N5L8 163 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 MARCH1Q8TCQ1 289 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 FLYWCH2Q96CP2 140 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 ABHD14BQ96IU4 210 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 NABP2Q9BQ15 211 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 GINS4Q9BRT9 223 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 MARVELD1Q9BSK0 173 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 MRPL20Q9BYC9 149 aaKnown RBP4.04□□□□□ -1.76
SSR3-207ENST00000478842 C20orf85Q9H1P6 137 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 VCX2Q9H322 139 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 TUBA4BQ9H853 241 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 CCL28Q9NRJ3 127 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 SLC2A9Q9NRM0 540 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 FLVCR2Q9UPI3 526 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 KIF25-AS1Q9Y6Z4 181 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 KMT2AQ03164 3969 aa4.04□□□□□ -1.76
SSR3-207ENST00000478842 MUC4Q99102 2169 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 IGHV1-3A0A0C4DH29 117 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 LINC00854A0A1B0GVQ3 168 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 C7orf66A4D0T2 115 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 CRYM-AS1A6NIL9 109 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 H0YJW9 148 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 GPR31O00270 319 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 RAB29O14966 203 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 MOSP00540 346 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 TCRBP04435 133 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 LGALS1P09382 135 aaKnown RBP4.03□□□□□ -1.76
SSR3-207ENST00000478842 CT45A6P0DMU7 189 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 CT45A5P0DMU8 189 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 CT45A7P0DMV0 189 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 FXYD4P59646 89 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 FGL1Q08830 312 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 C9orf129Q5T035 196 aaKnown RBP4.03□□□□□ -1.76
SSR3-207ENST00000478842 LGALS9CQ6DKI2 356 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 LHFPL5Q8TAF8 219 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 RTN4IP1Q8WWV3 396 aaPredicted RBP4.03□□□□□ -1.76
SSR3-207ENST00000478842 ARPC1AQ92747 370 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 GALNT14Q96FL9 552 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 HSPB9Q9BQS6 159 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 SLC25A21Q9BQT8 299 aaPredicted RBP4.03□□□□□ -1.76
SSR3-207ENST00000478842 ALX4Q9H161 411 aaPredicted RBP4.03□□□□□ -1.76
SSR3-207ENST00000478842 MCUBQ9NWR8 336 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 COPZ2Q9P299 210 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 SCP2D1Q9UJQ7 156 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 NUBP2Q9Y5Y2 271 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 WSB1Q9Y6I7 421 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
SSR3-207ENST00000478842 HELTA6NFD8 242 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 M0R1X1 148 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 RBFOX2O43251 390 aaKnown RBP eCLIP4.02□□□□□ -1.77
SSR3-207ENST00000478842 PGLYRP1O75594 196 aaPredicted RBP4.02□□□□□ -1.77
SSR3-207ENST00000478842 SLC22A5O76082 557 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 CNIH1O95406 144 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 IGKV1-39P01597 117 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 IGLV2-23P01705 113 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 IGKV1D-39P04432 117 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 RPL13AP40429 203 aaKnown RBP4.02□□□□□ -1.77
SSR3-207ENST00000478842 LEPP41159 167 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 PIGPP57054 158 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 DEFA1P59665 94 aa4.02□□□□□ -1.77
SSR3-207ENST00000478842 DEFA3P59666 94 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms