RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	RFNG	Q9Y644	331 aa		5.09	□□□□□ -1.59
HNRNPU-208	ENST00000475997	HEATR1	Q9H583	2144 aa	Known RBP	5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGHV3OR16-12	A0A075B7B8	117 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGHV3OR15-7	A0A075B7D8	119 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997		K7EP13	123 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SOCS3	O14543	225 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SMAD7	O15105	426 aa	Known RBP	5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TFF3	Q07654	80 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LAGE3	Q14657	143 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997	DENND4A	Q7Z401	1863 aa		5.09	□□□□□ -1.6
HNRNPU-208	ENST00000475997		A0A1B0GWJ7	208 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	GAGE12H	A6NDE8	117 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SHISA7	A6NL88	538 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C16orf97	H3BN30	126 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CD28	P10747	220 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	FAM90A2P	Q658T7	463 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PPP1R32	Q7Z5V6	425 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PPP1R27	Q86WC6	154 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	UBL5	Q9BZL1	73 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CDK2AP2	O75956	126 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LYPD6	Q86Y78	171 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	DUX5	Q96PT3	197 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LOC102723996	A0A087X1L8	192 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C9orf118	A6NHY6	69 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	MMP23A	O75900	390 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CELA3A	P09093	270 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CRYGS	P22914	178 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TMEM42	Q69YG0	159 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	MIR17HG	Q75NE6	70 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	AGMAT	Q9BSE5	352 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CHAC1	Q9BUX1	264 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SPTBN1	Q01082	2364 aa	Known RBP	5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PKDREJ	Q9NTG1	2253 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGHV3-72	A0A0B4J1Y9	119 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGKV1D-13	A0A0B4J2D9	117 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGKV1-13	P0DP09	117 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CDKN1B	P46527	198 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PVRIG	Q6DKI7	326 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	GTSCR1	Q86UQ5	136 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SNHG12	Q9BXW3	62 aa		5.08	□□□□□ -1.6
HNRNPU-208	ENST00000475997	RSPO1	Q2MKA7	263 aa	Predicted RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	RASL10A	Q92737	203 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CLEC7A	Q9BXN2	247 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LIME1	Q9H400	295 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C21orf62	Q9NYP8	219 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	WDR83OS	Q9Y284	106 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PTPRS	Q13332	1948 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	EML5	Q05BV3	1969 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TRAV8-3	A0A0A6YYJ7	113 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	FAM90A27P	A6NNH2	459 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IQCF6	A8MYZ5	107 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ID3	Q02535	119 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	HGFAC	Q04756	655 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C18orf12	Q96KH6	178 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CHD9	Q3L8U1	2897 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ACACA	Q13085	2346 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	FAM231B	A6NCW3	169 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C21orf140	B9A014	251 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ZNF688	P0C7X2	276 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	FOXG1	P55316	489 aa	Predicted RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LINC00158	P58513	81 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	RBM3	P98179	157 aa	Known RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ETDB	Q3ZM63	59 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ZC2HC1B	Q5TFG8	222 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C1orf210	Q8IVY1	113 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TTTY12	Q9BZ98	90 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CRIM1	Q9NZV1	1036 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PSG8	Q9UQ74	426 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	MYMX	A0A1B0GTQ4	84 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997		F8WEM9	126 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997		K7EP34	96 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ETV2	O00321	342 aa	Predicted RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LYL1	P12980	280 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SPEM2	Q0P670	501 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	RBMY1F	Q15415	496 aa	Known RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LINC01551	Q86U37	167 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	REPIN1	Q9BWE0	567 aa	Known RBP	5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	DEPP	Q9NTK1	212 aa		5.07	□□□□□ -1.6
HNRNPU-208	ENST00000475997	MUC22	E2RYF6	1773 aa	Predicted RBP	5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PROB1	E7EW31	1015 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	PAX4	O43316	350 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	IGHV2-70	P01814	119 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SELL	P14151	372 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997		Q0VG73	95 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C1orf122	Q6ZSJ8	110 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	USF3	Q68DE3	2245 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	hDV102S1	A0JD36	115 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	FAM90A9P	A6NNJ1	464 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TM4SF5	O14894	197 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	LEPROT	O15243	131 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	DUT	P33316	252 aa	Known RBP	5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TMEM256	Q8N2U0	113 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	ITLN1	Q8WWA0	313 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	SIGLEC12	Q96PQ1	595 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	C1QTNF5	Q9BXJ0	243 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TMEM126A	Q9H061	195 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	NCR2	O95944	276 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	CCL8	P80075	99 aa		5.06	□□□□□ -1.6
HNRNPU-208	ENST00000475997	TMEM171	Q8WVE6	324 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms