RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
U2AF1-209ENST00000475639 SNAI3Q3KNW1 292 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 GATD1Q8NB37 220 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 KCNK17Q96T54 332 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 TMEM131Q92545 1883 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 PAX4O43316 350 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 DNAJC30Q96LL9 226 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 E9PLN8 166 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 ZNF295-AS1Q8N0V1 137 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 C5orf63A6NC05 138 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 IZUMO1RA6ND01 250 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 F2Z2F3 143 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 CLPSP04118 112 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 SSBP2P81877 361 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-209ENST00000475639 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
U2AF1-209ENST00000475639 LHX2P50458 406 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 HSD52Q0P140 79 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 LEAP2Q969E1 77 aa9.61□□□□□ -0.87
U2AF1-209ENST00000475639 MRPL20Q9BYC9 149 aaKnown RBP9.61□□□□□ -0.87
U2AF1-209ENST00000475639 J3QW42 95 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 CD7P09564 240 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 KLF14Q8TD94 323 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-209ENST00000475639 Q96M66 194 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 NAV3Q8IVL0 2385 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 ZNHIT1O43257 154 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 NMSQ5H8A3 153 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 FAM57AQ8TBR7 257 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 FBXL15Q9H469 300 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 LHFPL6Q9Y693 200 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 IGHV5-10-1A0A0J9YXX1 117 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 GFRA3O60609 400 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 MMP23AO75900 390 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 COL9A1P20849 921 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 SLC25A47Q6Q0C1 308 aa9.6□□□□□ -0.87
U2AF1-209ENST00000475639 FOXA2Q9Y261 457 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-209ENST00000475639 B9A039 149 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 CD28P10747 220 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 CCL1P22362 96 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 RIPPLY3P57055 190 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 SLC50A1Q9BRV3 221 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 SPEGQ15772 3267 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 TMPRSS3P57727 454 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 YPEL3P61236 119 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-209ENST00000475639 RPP25LQ8N5L8 163 aaKnown RBP9.59□□□□□ -0.87
U2AF1-209ENST00000475639 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 PRTN3P24158 256 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 ZNF818PQ6ZRF7 136 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 NOTCH2Q04721 2471 aa9.59□□□□□ -0.87
U2AF1-209ENST00000475639 MUC22E2RYF6 1773 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-209ENST00000475639 DOCK7Q96N67 2140 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 Q6ZPA2 131 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 ADARB2-AS1A8MUL3 147 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 MLNRO43193 412 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 PI4KAP42356 2102 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 LHFPL4Q7Z7J7 247 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 CITED1Q99966 193 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV3-66A0A0C4DH42 116 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 INSP01308 110 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 IGFBP2P18065 325 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 ATP5L2Q7Z4Y8 100 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 PPP1R27Q86WC6 154 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 TIAF1O95411 115 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 FOXL1Q12952 345 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 LYZL4Q96KX0 146 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 GGTLC1Q9BX51 225 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 PILRBQ9UKJ0 227 aa9.58□□□□□ -0.88
U2AF1-209ENST00000475639 SONP18583 2426 aaKnown RBP9.57□□□□□ -0.88
U2AF1-209ENST00000475639 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
U2AF1-209ENST00000475639 CD300EQ496F6 205 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-209ENST00000475639 ARPC1AQ92747 370 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 CACNA1AO00555 2505 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 UCP1P25874 307 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 GLRXP35754 106 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 IGLV3-21P80748 117 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-209ENST00000475639 TMEM155Q4W5P6 130 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 STHQ8IWL8 128 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF525Q8N782 197 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-209ENST00000475639 TMEM167AQ8TBQ9 72 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF721Q8TF20 911 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 NPIPB13A6NJU9 1138 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 NPIPB5A8MRT5 1133 aa9.57□□□□□ -0.88
U2AF1-209ENST00000475639 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms