RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SDC2P34741 201 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 NUP62P37198 522 aaPredicted RBP4.73□□□□□ -1.65
HDAC1-204ENST00000471488 CNN1P51911 297 aaKnown RBP4.73□□□□□ -1.65
HDAC1-204ENST00000471488 SP6Q3SY56 376 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 DHRS11Q6UWP2 260 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 PRSS48Q7RTY5 328 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 TMEM144Q7Z5S9 345 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 GPR141Q7Z602 305 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 ZNF738Q8NE65 137 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 OR11H7Q8NGC8 314 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 SLC25A38Q96DW6 304 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 SSR3Q9UNL2 185 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 LOC100506127A0A0U1RQW1 187 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 J3KRW8 73 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 PSCAO43653 123 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 DUSP14O95147 198 aaKnown RBP4.72□□□□□ -1.65
HDAC1-204ENST00000471488 NXPH4O95158 308 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 RLN2P04090 185 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 ELK1P19419 428 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 HOXA5P20719 270 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 HTR2BP41595 481 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 RPL5P46777 297 aaKnown RBP4.72□□□□□ -1.65
HDAC1-204ENST00000471488 SUPT4H1P63272 117 aaKnown RBP4.72□□□□□ -1.65
HDAC1-204ENST00000471488 HIST1H1AQ02539 215 aaPredicted RBP4.72□□□□□ -1.65
HDAC1-204ENST00000471488 GAMTQ14353 236 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 ETFRF1Q6IPR1 90 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 ARRDC1Q8N5I2 433 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 RNF182Q8N6D2 247 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 SLC24A4Q8NFF2 622 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 CLUHP3Q96NS8 147 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 UPK3BQ9BT76 320 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 RSG1Q9BU20 258 aa4.72□□□□□ -1.65
HDAC1-204ENST00000471488 PAIP2BQ9ULR5 123 aaKnown RBP4.72□□□□□ -1.65
HDAC1-204ENST00000471488 PLAC8L1A1L4L8 177 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 KRTAP29-1A8MX34 341 aaPredicted RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 GABARAPH6UMI1 98 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 GABARAPO95166 117 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 PRSS3P35030 304 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 GALR1P47211 349 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 PIGPP57054 158 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 B2MP61769 119 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 ZNF90Q03938 601 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 KLF9Q13886 244 aaPredicted RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 NFE4Q86UQ8 179 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 CCDC28AQ8IWP9 274 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 SLC7A5P1Q8MH63 180 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 LINC00528Q8N1L1 170 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 LRRC20Q8TCA0 184 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 RNASEH2CQ8TDP1 164 aaKnown RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 DEFB104AQ8WTQ1 72 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 S100A16Q96FQ6 103 aaKnown RBP4.71□□□□□ -1.66
HDAC1-204ENST00000471488 CNBD2Q96M20 576 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 TMPRSS5Q9H3S3 457 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 DUSP21Q9H596 190 aa4.71□□□□□ -1.66
HDAC1-204ENST00000471488 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 A0A0A6YYH2 397 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 A0A0G2JRQ6 117 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 C3orf85A0A1B0GTC6 90 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 A6NJ64 397 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 ZNF98A6NK75 572 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SNRPGP15A8MWD9 76 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SNURFLB1AK76 121 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 NPIPB6E9PJ23 425 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SOCS3O14543 225 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 CRXO43186 299 aaPredicted RBP4.7□□□□□ -1.66
HDAC1-204ENST00000471488 TSPOP30536 169 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 RCVRNP35243 200 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 MEOX2P50222 304 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 AQP4P55087 323 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 TAS2R60P59551 318 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SPCS3P61009 180 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 AMTNQ6UX39 209 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 TMED4Q7Z7H5 227 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SLC35E1Q96K37 410 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 SLC25A32Q9H2D1 315 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.7□□□□□ -1.66
HDAC1-204ENST00000471488 FAM212BQ9NTI7 297 aaPredicted RBP4.7□□□□□ -1.66
HDAC1-204ENST00000471488 COPZ2Q9P299 210 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 CACNG5Q9UF02 275 aa4.7□□□□□ -1.66
HDAC1-204ENST00000471488 TRAV9-2A0A087WT02 112 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 INS-IGF2F8WCM5 200 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 FABP1P07148 127 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 ORM2P19652 201 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 MEF2DQ14814 521 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 SMUG1Q53HV7 270 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 C2orf83Q53S99 150 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 C1orf194Q5T5A4 169 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 SAMD13Q5VXD3 122 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 OR8G2PQ6IF36 304 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 SNX29P2Q8IUI4 249 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM256Q8N2U0 113 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 SAMD12Q8N8I0 201 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 TMEM263Q8WUH6 116 aaKnown RBP4.69□□□□□ -1.66
HDAC1-204ENST00000471488 VCX3BQ9H321 246 aa4.69□□□□□ -1.66
HDAC1-204ENST00000471488 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms