RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 FAM90A2PQ658T7 463 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 OR1L4Q8NGR5 311 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PFDN5Q99471 154 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 WDR61Q9GZS3 305 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 A0A0D9SG52 128 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 ZNF785A8K8V0 405 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 GP9P14770 177 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 ORM2P19652 201 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 ZNF345Q14585 488 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 OPCMLQ14982 345 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 C16orf54Q6UWD8 224 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 GTSCR1Q86UQ5 136 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 TMEM61Q8N0U2 210 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 STPG3Q8N7X2 389 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 GATAD1Q8WUU5 269 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 PPP1R14BQ96C90 147 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 RNF2Q99496 336 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 FAM110AQ9BQ89 295 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 NPCDR1Q9BY65 106 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 SEPSECSQ9HD40 501 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 SLC39A9Q9NUM3 307 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 HIGD1AQ9Y241 93 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
SPTLC1-204ENST00000469778 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 G3V3Q6 166 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 JTBO76095 146 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 MEOX2P50222 304 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 KRTAP10-11P60412 298 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 AKAP14Q86UN6 197 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 OR1B1Q8NGR6 318 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 ST8SIA2Q92186 375 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 MFFQ9GZY8 342 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 TIMM9Q9Y5J7 89 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 SORL1Q92673 2214 aa9.51□□□□□ -0.89
SPTLC1-204ENST00000469778 RNF222A6NCQ9 220 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 ZNF98A6NK75 572 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 COX7A2P2O60397 106 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 APOHP02749 345 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 OR5G3P0C626 314 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 B2MP61769 119 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 GUCA2BQ16661 112 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 GNPNAT1Q96EK6 184 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 HYLS1Q96M11 299 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 SHANK2-AS3Q9BTD1 123 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 PXMP4Q9Y6I8 212 aa9.5□□□□□ -0.89
SPTLC1-204ENST00000469778 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 ARPC5O15511 151 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 RPL7P18124 248 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 EDN2P20800 178 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 GALR1P47211 349 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 SERF2P84101 59 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 SIGLEC15Q6ZMC9 328 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 PSMG3Q9BT73 122 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 SLC25A39Q9BZJ4 359 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 ARV1Q9H2C2 271 aa9.49□□□□□ -0.89
SPTLC1-204ENST00000469778 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 IZUMO1RA6ND01 250 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 A8MZ25 164 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 H3BRN7 92 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 MBP02144 154 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 C1QBP02746 253 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 EIF5AP63241 154 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 LINC00305Q7Z4B0 112 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 WFDC1Q9HC57 220 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 AURKAIP1Q9NWT8 199 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-204ENST00000469778 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 C4BPBP20851 252 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 OR2G3Q8NGZ4 309 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
SPTLC1-204ENST00000469778 hCG_2014768A0A024R1R8 64 aa9.46□□□□□ -0.9
SPTLC1-204ENST00000469778 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
SPTLC1-204ENST00000469778 ID1P41134 155 aa9.46□□□□□ -0.9
SPTLC1-204ENST00000469778 DEFA6Q01524 100 aa9.46□□□□□ -0.9
SPTLC1-204ENST00000469778 ACOT6Q3I5F7 207 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms