RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 IL15RAQ13261 267 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 TMEM182Q6ZP80 229 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-206ENST00000465877 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 PPP1R14BQ96C90 147 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 NPVFQ9HCQ7 196 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-206ENST00000465877 SLC45A2Q9UMX9 530 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 DYNC2H1Q8NCM8 4307 aaKnown RBP9.52□□□□□ -0.88
COL5A1-206ENST00000465877 KIR2DL5BA0A0G2JN68 375 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 KIR2DL5BA0A0G2JPC4 375 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 SIX6O95475 246 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 PTTG1O95997 202 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 LINC00869P0C866 280 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 DEFB135Q30KP9 77 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 STX12Q86Y82 276 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 KIR2DL5AQ8N109 375 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 KIR2DL5BQ8NHK3 375 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 GGACTQ9BVM4 153 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 NMES1Q9C002 83 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 FBXL17Q9UF56 701 aa9.52□□□□□ -0.89
COL5A1-206ENST00000465877 IGSF23A1L1A6 192 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 FAM24AA6NFZ4 105 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 SSNA1O43805 119 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 DEDDO75618 318 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 CST7O76096 145 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 ORM2P19652 201 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 SELENOTP62341 195 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 LRRC37A5PQ49AS3 106 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 TMEM217Q8N7C4 229 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 OR1B1Q8NGR6 318 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 TMEM147Q9BVK8 224 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 SLC25A22Q9H936 323 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 DOK5Q9P104 306 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 LYSTQ99698 3801 aa9.51□□□□□ -0.89
COL5A1-206ENST00000465877 UBE2L5PA0A1B0GUS4 154 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 ZNF98A6NK75 572 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 H3BRN7 92 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 UBE2CO00762 179 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 SULT1A1P50225 295 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 H2BFSP57053 126 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
COL5A1-206ENST00000465877 Q6ZWC4 215 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 STHQ8IWL8 128 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 MUC7Q8TAX7 377 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 TP53TG1Q9Y2A0 90 aa9.5□□□□□ -0.89
COL5A1-206ENST00000465877 AGPAT2O15120 278 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 S100A7P31151 101 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 PLP1P60201 277 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 RAP2BP61225 183 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
COL5A1-206ENST00000465877 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 MGST2Q99735 147 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 SEPSECSQ9HD40 501 aaKnown RBP9.49□□□□□ -0.89
COL5A1-206ENST00000465877 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 OR5AC2Q9NZP5 309 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 ALG5Q9Y673 324 aa9.49□□□□□ -0.89
COL5A1-206ENST00000465877 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 KNCNA6PVL3 124 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 SOCS3O14543 225 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 SPRY2O43597 315 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 CA1P00915 261 aaPredicted RBP9.48□□□□□ -0.89
COL5A1-206ENST00000465877 GALR1P47211 349 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 PSMB3P49720 205 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 HBG1P69891 147 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 HBG2P69892 147 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
COL5A1-206ENST00000465877 BAXQ07812 192 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 VWC2Q2TAL6 325 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 ACTL10Q5JWF8 245 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 PPP1R1CQ8WVI7 109 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 SHANK2-AS3Q9BTD1 123 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 SLC25A39Q9BZJ4 359 aaPredicted RBP9.48□□□□□ -0.89
COL5A1-206ENST00000465877 ARL6Q9H0F7 186 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
COL5A1-206ENST00000465877 E5RGE8 158 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 C3orf84H3BNL1 204 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 HYPMO75409 117 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 OR5G3P0C626 314 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 S100A11P31949 105 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 CAMLGP49069 296 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 MEOX2P50222 304 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL5A1-206ENST00000465877 RNF183Q96D59 192 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 GPR82Q96P67 336 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 ARV1Q9H2C2 271 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
COL5A1-206ENST00000465877 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
COL5A1-206ENST00000465877 H0YIZ8 118 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 RLN2P04090 185 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms