RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 INMT-MINDY4F8WBC2 141 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 SSSCA1O60232 199 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 FABP1P07148 127 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 PAX9P55771 341 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 CEMP1Q6PRD7 247 aaPredicted RBP15.84■□□□□ 0.13
LIME1-203ENST00000465591 TMEM217Q8N7C4 229 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 C11orf68Q9H3H3 251 aaKnown RBP15.84■□□□□ 0.13
LIME1-203ENST00000465591 PSENENQ9NZ42 101 aa15.84■□□□□ 0.13
LIME1-203ENST00000465591 NUPR2A6NF83 97 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 PRAF2O60831 178 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 PTTG1O95997 202 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 SPP1P10451 314 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 NUP62P37198 522 aaPredicted RBP15.83■□□□□ 0.12
LIME1-203ENST00000465591 MORN3Q6PF18 240 aaPredicted RBP15.83■□□□□ 0.12
LIME1-203ENST00000465591 SEC22CQ9BRL7 303 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 MARVELD1Q9BSK0 173 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 SEPSECSQ9HD40 501 aaKnown RBP15.83■□□□□ 0.12
LIME1-203ENST00000465591 CLEC5AQ9NY25 188 aa15.83■□□□□ 0.12
LIME1-203ENST00000465591 SOCS3O14543 225 aa15.82■□□□□ 0.12
LIME1-203ENST00000465591 NANOS2P60321 138 aaKnown RBP15.82■□□□□ 0.12
LIME1-203ENST00000465591 SNRPD3P62318 126 aaKnown RBP15.82■□□□□ 0.12
LIME1-203ENST00000465591 IAH1Q2TAA2 248 aaPredicted RBP15.82■□□□□ 0.12
LIME1-203ENST00000465591 GDF5OSQ5U4N7 250 aa15.82■□□□□ 0.12
LIME1-203ENST00000465591 C12orf45Q8N5I9 185 aaPredicted RBP15.82■□□□□ 0.12
LIME1-203ENST00000465591 ZBTB8BQ8NAP8 495 aaPredicted RBP15.82■□□□□ 0.12
LIME1-203ENST00000465591 Q8NAQ8 132 aa15.82■□□□□ 0.12
LIME1-203ENST00000465591 CSNK1G2-AS1Q8NCQ2 148 aa15.82■□□□□ 0.12
LIME1-203ENST00000465591 H3BMM0 161 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 SCGB1D2O95969 90 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 AKR1C1Q04828 323 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 C1orf194Q5T5A4 169 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 PHLDA1Q8WV24 401 aaPredicted RBP15.81■□□□□ 0.12
LIME1-203ENST00000465591 SMIM8Q96KF7 97 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 C17orf77Q96MU5 243 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 PFDN2Q9UHV9 154 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 RCL1Q9Y2P8 373 aaKnown RBP15.81■□□□□ 0.12
LIME1-203ENST00000465591 X6R8D5 127 aa15.81■□□□□ 0.12
LIME1-203ENST00000465591 EPPK1P58107 5090 aaKnown RBP15.81■□□□□ 0.12
LIME1-203ENST00000465591 CCSO14618 274 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 RBMY1A1P0DJD3 496 aaKnown RBP15.8■□□□□ 0.12
LIME1-203ENST00000465591 RBMY1CP0DJD4 496 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 RBMY1FQ15415 496 aaKnown RBP15.8■□□□□ 0.12
LIME1-203ENST00000465591 TMEM14EPQ6UXP3 125 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 TMEM144Q7Z5S9 345 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 LINC00476Q8WZB0 136 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 PPP1R14BQ96C90 147 aa15.8■□□□□ 0.12
LIME1-203ENST00000465591 IGHV4-28A0A0C4DH34 117 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 ZNF705EA8MWA4 302 aaPredicted RBP15.79■□□□□ 0.12
LIME1-203ENST00000465591 METTL15P1P0C7V9 234 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 TMEM41BQ5BJD5 291 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 OR8I2Q8N0Y5 310 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 C11orf45Q8TAV5 145 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 SLC25A32Q9H2D1 315 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 GSKIPQ9P0R6 139 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 FBXL17Q9UF56 701 aa15.79■□□□□ 0.12
LIME1-203ENST00000465591 SMCO3A2RU48 225 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 HLA-DRB4P13762 266 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 ORM2P19652 201 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 RRAS2P62070 204 aaPredicted RBP15.78■□□□□ 0.12
LIME1-203ENST00000465591 BPIFCQ8NFQ6 507 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 LINC00052Q96N35 136 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 HLA-DRB4X5D2U9 266 aa15.78■□□□□ 0.12
LIME1-203ENST00000465591 ZNF98A6NK75 572 aa15.77■□□□□ 0.12
LIME1-203ENST00000465591 CFDP00746 253 aaPredicted RBP15.77■□□□□ 0.12
LIME1-203ENST00000465591 MBPP02686 304 aaPredicted RBP15.77■□□□□ 0.12
LIME1-203ENST00000465591 ARL16Q0P5N6 197 aa15.77■□□□□ 0.12
LIME1-203ENST00000465591 RGS21Q2M5E4 152 aa15.77■□□□□ 0.12
LIME1-203ENST00000465591 CYP2G1PQ6ZSU1 146 aa15.77■□□□□ 0.12
LIME1-203ENST00000465591 SLC25A22Q9H936 323 aa15.77■□□□□ 0.12
LIME1-203ENST00000465591 PSMB3P49720 205 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 DLK1P80370 383 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 OR1B1Q8NGR6 318 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 C20orf173Q96LM9 149 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 DOK5Q9P104 306 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 XCL2Q9UBD3 114 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 SLC45A2Q9UMX9 530 aa15.76■□□□□ 0.11
LIME1-203ENST00000465591 C7orf66A4D0T2 115 aa15.75■□□□□ 0.11
LIME1-203ENST00000465591 IGKV3-20P01619 116 aa15.75■□□□□ 0.11
LIME1-203ENST00000465591 SCRT1Q9BWW7 348 aa15.75■□□□□ 0.11
LIME1-203ENST00000465591 SAV1Q9H4B6 383 aaPredicted RBP15.75■□□□□ 0.11
LIME1-203ENST00000465591 KLK5Q9Y337 293 aaPredicted RBP15.75■□□□□ 0.11
LIME1-203ENST00000465591 ELOA3CA0A087WX78 387 aaPredicted RBP15.74■□□□□ 0.11
LIME1-203ENST00000465591 C5orf51A6NDU8 294 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 FAM25EA8MYX2 175 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 F6UB75 175 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 TSC22D2O75157 780 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 LY6G6CO95867 125 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 MIFP14174 115 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 ID1P41134 155 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 FXYD7P58549 80 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 TAS2R30P59541 319 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 RSG1Q9BU20 258 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 TMEM147Q9BVK8 224 aa15.74■□□□□ 0.11
LIME1-203ENST00000465591 H3BRN7 92 aa15.73■□□□□ 0.11
LIME1-203ENST00000465591 ISLRO14498 428 aa15.73■□□□□ 0.11
LIME1-203ENST00000465591 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.73■□□□□ 0.11
LIME1-203ENST00000465591 FOXI2Q6ZQN5 318 aa15.73■□□□□ 0.11
LIME1-203ENST00000465591 MFFQ9GZY8 342 aa15.73■□□□□ 0.11
LIME1-203ENST00000465591 KMT2AQ03164 3969 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 LINC00869P0C866 280 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms