RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ZNF546Q86UE3 836 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-207ENST00000461113 MBD2Q9UBB5 411 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 MLXQ9UH92 298 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 IGKV1D-37A0A075B6S9 117 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 HELTA6NFD8 242 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 OR4C46A6NHA9 309 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-207ENST00000461113 MPDU1O75352 247 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 DFFBO76075 338 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 IFNA5P01569 189 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 RPL12P30050 165 aaKnown RBP9.43□□□□□ -0.9
HDAC4-207ENST00000461113 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-207ENST00000461113 ARL16Q0P5N6 197 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 PXDC1Q5TGL8 231 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 Q6ZRG5 221 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 ZNF709Q8N972 641 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 INO80EQ8NBZ0 244 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-207ENST00000461113 OR5C1Q8NGR4 320 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
HDAC4-207ENST00000461113 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
HDAC4-207ENST00000461113 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 UBE2L5PA0A1B0GUS4 154 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 H0YIZ8 118 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 TSPAN4O14817 238 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 HYPMO75409 117 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 ORM2P19652 201 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 EDN2P20800 178 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 CAMLGP49069 296 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 NHLH2Q02577 135 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 OR2T35Q8NGX2 323 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 SCGB1C1Q8TD33 95 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 ST8SIA2Q92186 375 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 WDR89Q96FK6 387 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-207ENST00000461113 RNF2Q99496 336 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 KCNIP2Q9NS61 270 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 FBXL17Q9UF56 701 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 SLC45A2Q9UMX9 530 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
HDAC4-207ENST00000461113 IGKV1OR2-108A0A075B7D4 117 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 AGPAT2O15120 278 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 OR5G3P0C626 314 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 LINC00869P0C866 280 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 FGF7P21781 194 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 CD81P60033 236 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 CLINT1Q14677 625 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-207ENST00000461113 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 HSPB11Q9Y547 144 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 SELENOKQ9Y6D0 94 aa9.41□□□□□ -0.9
HDAC4-207ENST00000461113 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 IZUMO1RA6ND01 250 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 ZNF785A8K8V0 405 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 C17orf112F2Z3M2 114 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 VWC2Q2TAL6 325 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 ATP5SQ99766 215 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 NEURL2Q9BR09 285 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 ARL6Q9H0F7 186 aa9.4□□□□□ -0.9
HDAC4-207ENST00000461113 ELOA3CA0A087WX78 387 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-207ENST00000461113 COX7A2P2O60397 106 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-207ENST00000461113 GATA2P23769 480 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-207ENST00000461113 GALR1P47211 349 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 TFPI2P48307 235 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 WFDC3Q8IUB2 231 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 GBGT1Q8N5D6 347 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 STXBP6Q8NFX7 210 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 OR1L4Q8NGR5 311 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 GPR82Q96P67 336 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 PFDN5Q99471 154 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 DOK5Q9P104 306 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 U3KQE9 123 aa9.39□□□□□ -0.91
HDAC4-207ENST00000461113 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 BUB3O43684 328 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
HDAC4-207ENST00000461113 PLP1P60201 277 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 B2MP61769 119 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 ZNF266Q14584 549 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 SAMD13Q5VXD3 122 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 STPG3Q8N7X2 389 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 MGST2Q99735 147 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
HDAC4-207ENST00000461113 SORL1Q92673 2214 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms