RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 LYZP61626 148 aa11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 SIGLEC15Q6ZMC9 328 aa11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 TRPT1Q86TN4 253 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 PBDC1Q9BVG4 233 aa11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
SCAMP4-205ENST00000452128 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 FAM25EA8MYX2 175 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 INMT-MINDY4F8WBC2 141 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 NUP62P37198 522 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 DEFB135Q30KP9 77 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 ENKURQ8TC29 256 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
SCAMP4-205ENST00000452128 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 PRAF2O60831 178 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 LYL1P12980 280 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■□□ 17.5
SCAMP4-205ENST00000452128 AKR1C1Q04828 323 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 RAB32Q13637 225 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 GSG1LQ6UXU4 331 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 LYSTQ99698 3801 aa11.78□□□□□ -0.52
SCAMP4-205ENST00000452128 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 SELENOTP62341 195 aa11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 LSM5Q9Y4Y9 91 aaKnown RBP11.77□□□□□ -0.53
SCAMP4-205ENST00000452128 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 H0YIZ8 118 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 SIX6O95475 246 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 LINC00869P0C866 280 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 TMEM252Q8N6L7 170 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 SLC25A32Q9H2D1 315 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 GPN1Q9HCN4 374 aaPredicted RBP11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 FBXL17Q9UF56 701 aa11.76□□□□□ -0.53
SCAMP4-205ENST00000452128 H3BMM0 161 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 H3BRN7 92 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 ORM2P19652 201 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 H2BFSP57053 126 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 GATAD1Q8WUU5 269 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 CHAC2Q8WUX2 184 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 MGST2Q99735 147 aa11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
SCAMP4-205ENST00000452128 SMCO3A2RU48 225 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 L7N2F9 121 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 AGPAT2O15120 278 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 CST7O76096 145 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 VAMP2P63027 116 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 SLC38A11Q08AI6 406 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 ACTL10Q5JWF8 245 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 NMES1Q9C002 83 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
SCAMP4-205ENST00000452128 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 HYPMO75409 117 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 C4BPBP20851 252 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 PSMB3P49720 205 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 SULT1A1P50225 295 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 DEFA1P59665 94 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 DEFA3P59666 94 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 DEFB1P60022 68 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 SNRPD3P62318 126 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 STHQ8IWL8 128 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 C20orf173Q96LM9 149 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 CLUHP3Q96NS8 147 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 RSG1Q9BU20 258 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
SCAMP4-205ENST00000452128 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 A8MTW9 85 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 ISLRO14498 428 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 GOSR2O14653 212 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 SPP1P10451 314 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 HLA-DRB4P13762 266 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 CAV2P51636 162 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 PRR20EP86478 221 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 PRR20CP86479 221 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 PRR20DP86480 221 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 PRR20BP86481 221 aa11.72□□□□□ -0.53
SCAMP4-205ENST00000452128 PRR20AP86496 221 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms