RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 S100A7P31151 101 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 GALR1P47211 349 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 MEOX2P50222 304 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 FXYD7P58549 80 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 UBE2MP61081 183 aaKnown RBP13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 GDF5OSQ5U4N7 250 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 TRIQKQ629K1 86 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 BPIFCQ8NFQ6 507 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 CELA1Q9UNI1 258 aa13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 STRAPQ9Y3F4 350 aaKnown RBP13.31□□□□□ -0.28
AC004540.1-201ENST00000439120 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 H3BP45 60 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 ISLRO14498 428 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 DEFB1P60022 68 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 SPATA31B1PQ5VZV4 182 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 ZNF767PQ75MW2 155 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
AC004540.1-201ENST00000439120 DEFB131BA0A096LNP1 70 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 ORM2P19652 201 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 PRR20EP86478 221 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 PRR20CP86479 221 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 PRR20DP86480 221 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 PRR20BP86481 221 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 PRR20AP86496 221 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 TMEM147Q9BVK8 224 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 SLC45A2Q9UMX9 530 aa13.29□□□□□ -0.28
AC004540.1-201ENST00000439120 C9orf170A2RU37 121 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 SMCO3A2RU48 225 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 TMEM189A5PLL7 270 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 NAP1L6A6NFF2 107 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 SMIM9A6NGZ8 99 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 SOCS3O14543 225 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 IFNA21P01568 189 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 EMP1P54849 157 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 ZNF705AQ6ZN79 300 aaPredicted RBP13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 NEU1Q99519 415 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 SRRQ9GZT4 340 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 SLC25A32Q9H2D1 315 aa13.28□□□□□ -0.28
AC004540.1-201ENST00000439120 PRSS46E5RG02 174 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 ADAP1O75689 374 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 SPART-AS1P0CW21 52 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 PSG9Q00887 426 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 ACOT7LQ6ZUV0 252 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 OR1B1Q8NGR6 318 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 CLUHP3Q96NS8 147 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 RSG1Q9BU20 258 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 GOLT1BQ9Y3E0 138 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 RFNGQ9Y644 331 aa13.27□□□□□ -0.29
AC004540.1-201ENST00000439120 LINC00854A0A1B0GVQ3 168 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF98A6NK75 572 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 CENPXA8MT69 81 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 F6UB75 175 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF701M0R085 212 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 NDUFB6O95139 128 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 GATA2P23769 480 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 FAM78BQ5VT40 261 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 GSG1LQ6UXU4 331 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 ZNF709Q8N972 641 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 GPR82Q96P67 336 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 RBM38Q9H0Z9 239 aaKnown RBP13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 PSENENQ9NZ42 101 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 FRAS1Q86XX4 4008 aa13.26□□□□□ -0.29
AC004540.1-201ENST00000439120 A0A0J9YX75 114 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 SSSCA1O60232 199 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 AMBPP02760 352 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 PAX9P55771 341 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 C4orf46Q504U0 113 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 OR4D5Q8NGN0 318 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 DOK5Q9P104 306 aa13.25□□□□□ -0.29
AC004540.1-201ENST00000439120 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 IL5P05113 134 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 OR4E1P0C645 316 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 RAP2BP61225 183 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 ID3Q02535 119 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 BAK1Q16611 211 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
AC004540.1-201ENST00000439120 SCGB1D2O95969 90 aa13.23□□□□□ -0.29
AC004540.1-201ENST00000439120 HBE1P02100 147 aa13.23□□□□□ -0.29
AC004540.1-201ENST00000439120 FGL1Q08830 312 aa13.23□□□□□ -0.29
AC004540.1-201ENST00000439120 CYP2G1PQ6ZSU1 146 aa13.23□□□□□ -0.29
AC004540.1-201ENST00000439120 TMEM208Q9BTX3 173 aa13.23□□□□□ -0.29
AC004540.1-201ENST00000439120 P0DMU3 169 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
AC004540.1-201ENST00000439120 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms