RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TINCRA0A1B0GVN0 87 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF860A6NHJ4 632 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CPSF4LA6NMK7 179 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RIIAD1A6NNX1 92 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 C11orf94C9JXX5 98 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 F6UB75 175 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 LINC01619G3V211 115 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 C15orf65H3BRN8 121 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 H3BUX3 64 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MYL12BO14950 172 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TCAPO15273 167 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 GSTZ1O43708 216 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR2T1O43869 369 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PFDN1O60925 122 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RDH16O75452 317 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ARL6IP5O75915 188 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SNAPC5O75971 98 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SOX14O95416 240 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 HAND1O96004 215 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 IFNGP01579 166 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGLV2-8P01709 118 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 P01737 135 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CD74P04233 296 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 UCHL1P09936 223 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ASAH2BP0C7U1 165 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RNASE2P10153 161 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 IFI30P13284 250 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ALOX5APP20292 161 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PVALBP20472 110 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MYL9P24844 172 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SDC2P34741 201 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SSTR5P35346 364 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CXCL5P42830 114 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 P2RX1P51575 399 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 AP2S1P53680 142 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TAS2R43P59537 309 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 DEFA1P59665 94 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 DEFA3P59666 94 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 FGF12P61328 243 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 NUTF2P61970 127 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RPS11P62280 158 aaKnown RBP eCLIP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CNBPP62633 177 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RANP62826 216 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PPP3R1P63098 170 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC35A1P78382 337 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 BTG2P78543 158 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 HOXC5Q00444 222 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 FABP5Q01469 135 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SKP2Q13309 424 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CDK5R1Q15078 307 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PON3Q15166 354 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM183BQ1AE95 376 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CEACAM16Q2WEN9 425 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ABCA11PQ4W5N1 156 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ACSM3Q53FZ2 586 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 HSD17B12Q53GQ0 312 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 YIF1BQ5BJH7 314 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SPIN3Q5JUX0 258 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MRPL2Q5T653 305 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 HIST2H3PS2Q5TEC6 136 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM42Q69YG0 159 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 LYPD2Q6UXB3 125 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM91Q6ZNR0 172 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMED4Q7Z7H5 227 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OAFQ86UD1 273 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PCP2Q8IVA1 136 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM183AQ8IXX5 376 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 LGI3Q8N145 548 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ARRDC1Q8N5I2 433 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 GATD1Q8NB37 220 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 HSD17B11Q8NBQ5 300 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CHST4Q8NCG5 386 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 APCDD1LQ8NCL9 501 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR52L1Q8NGH7 329 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR6N1Q8NGY5 312 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR2T4Q8NH00 348 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5W2Q8NH69 310 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MFSD8Q8NHS3 518 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 GPR119Q8TDV5 335 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CASTOR1Q8WTX7 329 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 C15orf40Q8WUR7 153 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 GHSRQ92847 366 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RPUSD4Q96CM3 377 aaKnown RBP1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SMIM12Q96EX1 92 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MRAP2Q96G30 205 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR10C1Q96KK4 312 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 PGLYRP3Q96LB9 341 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CEP19Q96LK0 163 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 SULT4A1Q9BR01 284 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 MARVELD1Q9BSK0 173 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 C1QTNF6Q9BXI9 259 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 METTL9Q9H1A3 318 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TLNRD1Q9H1K6 362 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ARV1Q9H2C2 271 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TXNIPQ9H3M7 391 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RNF167Q9H6Y7 350 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 C12orf4Q9NQ89 552 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 CA10Q9NS85 328 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TAS2R5Q9NYW4 299 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 DNAJC27Q9NZQ0 273 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms