RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RYR3Q15413 4870 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 C5orf51A6NDU8 294 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 FNDC10F2Z333 226 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 CA1P00915 261 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-202ENST00000419181 GATA2P23769 480 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-202ENST00000419181 SNRPD3P62318 126 aaKnown RBP14.89□□□□□ -0.03
GTF3A-202ENST00000419181 OR10P1Q8NGE3 313 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 GATAD1Q8WUU5 269 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 C2orf50Q96LR7 162 aa14.89□□□□□ -0.03
GTF3A-202ENST00000419181 A0A0J9YWU9 116 aa14.88□□□□□ -0.03
GTF3A-202ENST00000419181 KNCNA6PVL3 124 aa14.88□□□□□ -0.03
GTF3A-202ENST00000419181 K7EPK0 472 aa14.88□□□□□ -0.03
GTF3A-202ENST00000419181 RRAS2P62070 204 aaPredicted RBP14.88□□□□□ -0.03
GTF3A-202ENST00000419181 PPP1R14BQ96C90 147 aa14.88□□□□□ -0.03
GTF3A-202ENST00000419181 DYNC2H1Q8NCM8 4307 aaKnown RBP14.87□□□□□ -0.03
GTF3A-202ENST00000419181 ARL16Q0P5N6 197 aa14.87□□□□□ -0.03
GTF3A-202ENST00000419181 IL15RAQ13261 267 aa14.87□□□□□ -0.03
GTF3A-202ENST00000419181 ACTL10Q5JWF8 245 aa14.87□□□□□ -0.03
GTF3A-202ENST00000419181 CYP2G1PQ6ZSU1 146 aa14.87□□□□□ -0.03
GTF3A-202ENST00000419181 C11orf1Q9H5F2 150 aa14.87□□□□□ -0.03
GTF3A-202ENST00000419181 LSM5Q9Y4Y9 91 aaKnown RBP14.87□□□□□ -0.03
GTF3A-202ENST00000419181 L7N2F9 121 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 GIG44P09565 113 aaPredicted RBP14.86□□□□□ -0.03
GTF3A-202ENST00000419181 ORM2P19652 201 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 VAMP2P63027 116 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 NRARPQ7Z6K4 114 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 OR8I2Q8N0Y5 310 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 NPVFQ9HCQ7 196 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 MGAT4CQ9UBM8 478 aa14.86□□□□□ -0.03
GTF3A-202ENST00000419181 ZNF98A6NK75 572 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 SOCS3O14543 225 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 SPP1P10451 314 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 SELENOTP62341 195 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 EWSR1Q01844 656 aaKnown RBP eCLIP14.85□□□□□ -0.03
GTF3A-202ENST00000419181 OR1B1Q8NGR6 318 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 TMEM147Q9BVK8 224 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 GGACTQ9BVM4 153 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 SLC25A32Q9H2D1 315 aa14.85□□□□□ -0.03
GTF3A-202ENST00000419181 ATF4P18848 351 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-202ENST00000419181 PLP1P60201 277 aa14.84□□□□□ -0.03
GTF3A-202ENST00000419181 MORN3Q6PF18 240 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-202ENST00000419181 TEPPQ6URK8 271 aa14.84□□□□□ -0.03
GTF3A-202ENST00000419181 RARRES2Q99969 163 aa14.84□□□□□ -0.03
GTF3A-202ENST00000419181 SLC25A22Q9H936 323 aa14.84□□□□□ -0.03
GTF3A-202ENST00000419181 GPN1Q9HCN4 374 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-202ENST00000419181 DEDDO75618 318 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 LINC00869P0C866 280 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 C4BPBP20851 252 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 PSMB3P49720 205 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 CAV2P51636 162 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 TMEM41BQ5BJD5 291 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 OR11H2Q8NH07 326 aa14.83□□□□□ -0.04
GTF3A-202ENST00000419181 H3BRN7 92 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 PRAF2O60831 178 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 PVALBP20472 110 aaPredicted RBP14.82□□□□□ -0.04
GTF3A-202ENST00000419181 S100A7P31151 101 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 ID1P41134 155 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 GALR1P47211 349 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 BCAP31P51572 246 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 S100A10P60903 97 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 SLC38A11Q08AI6 406 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 RAB32Q13637 225 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 C17orf77Q96MU5 243 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 GPR82Q96P67 336 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 SCRT1Q9BWW7 348 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
GTF3A-202ENST00000419181 DOK5Q9P104 306 aa14.82□□□□□ -0.04
GTF3A-202ENST00000419181 LCE6AA0A183 80 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 INMT-MINDY4F8WBC2 141 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 H3BMM0 161 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 ISLRO14498 428 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 HYPMO75409 117 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 HLA-DRB4P13762 266 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 MEOX2P50222 304 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 DEFA1P59665 94 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 DEFA3P59666 94 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 RAP2BP61225 183 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 SAMD13Q5VXD3 122 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 MARVELD1Q9BSK0 173 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 SHANK2-AS3Q9BTD1 123 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 LYRM2Q9NU23 88 aaPredicted RBP14.81□□□□□ -0.04
GTF3A-202ENST00000419181 HIGD1AQ9Y241 93 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 HLA-DRB4X5D2U9 266 aa14.81□□□□□ -0.04
GTF3A-202ENST00000419181 FAM24AA6NFZ4 105 aa14.8□□□□□ -0.04
GTF3A-202ENST00000419181 CST7O76096 145 aa14.8□□□□□ -0.04
GTF3A-202ENST00000419181 ZNF546Q86UE3 836 aa14.8□□□□□ -0.04
GTF3A-202ENST00000419181 TMEM217Q8N7C4 229 aa14.8□□□□□ -0.04
GTF3A-202ENST00000419181 LINC00052Q96N35 136 aa14.8□□□□□ -0.04
GTF3A-202ENST00000419181 C11orf68Q9H3H3 251 aaKnown RBP14.8□□□□□ -0.04
GTF3A-202ENST00000419181 AGPAT2O15120 278 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 OR5G3P0C626 314 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 DEFB1P60022 68 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 GDF5OSQ5U4N7 250 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 UHRF2Q96PU4 802 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 MGST2Q99735 147 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 RSG1Q9BU20 258 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 SAV1Q9H4B6 383 aaPredicted RBP14.79□□□□□ -0.04
GTF3A-202ENST00000419181 LYSTQ99698 3801 aa14.79□□□□□ -0.04
GTF3A-202ENST00000419181 GOSR2O14653 212 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms