RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
TRIM56-202ENST00000412507 KNCNA6PVL3 124 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 K7EPK0 472 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 L7N2F9 121 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 CFDP00746 253 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-202ENST00000412507 VAMP2P63027 116 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 DLK1P80370 383 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 PSMG4Q5JS54 123 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 STHQ8IWL8 128 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
TRIM56-202ENST00000412507 ARL16Q0P5N6 197 aa13.83□□□□□ -0.2
TRIM56-202ENST00000412507 GSG1LQ6UXU4 331 aa13.83□□□□□ -0.2
TRIM56-202ENST00000412507 CYP2G1PQ6ZSU1 146 aa13.83□□□□□ -0.2
TRIM56-202ENST00000412507 FBXL17Q9UF56 701 aa13.83□□□□□ -0.2
TRIM56-202ENST00000412507 ORM2P19652 201 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 OXA1LQ15070 435 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 C1orf194Q5T5A4 169 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 NPVFQ9HCQ7 196 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 MGAT4CQ9UBM8 478 aa13.82□□□□□ -0.2
TRIM56-202ENST00000412507 DYNC2H1Q8NCM8 4307 aaKnown RBP13.82□□□□□ -0.2
TRIM56-202ENST00000412507 CA1P00915 261 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-202ENST00000412507 BCAP31P51572 246 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 S100A10P60903 97 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 SNRPD3P62318 126 aaKnown RBP13.81□□□□□ -0.2
TRIM56-202ENST00000412507 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 TRPT1Q86TN4 253 aaKnown RBP13.81□□□□□ -0.2
TRIM56-202ENST00000412507 OR1B1Q8NGR6 318 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 C11orf1Q9H5F2 150 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 GPN1Q9HCN4 374 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-202ENST00000412507 SEPSECSQ9HD40 501 aaKnown RBP13.81□□□□□ -0.2
TRIM56-202ENST00000412507 SLC45A2Q9UMX9 530 aa13.81□□□□□ -0.2
TRIM56-202ENST00000412507 LYSTQ99698 3801 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 A0A0J9YWU9 116 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 INMT-MINDY4F8WBC2 141 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 IL15RAQ13261 267 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 DOK5Q9P104 306 aa13.8□□□□□ -0.2
TRIM56-202ENST00000412507 RYR3Q15413 4870 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 FAM24AA6NFZ4 105 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 ZNF98A6NK75 572 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 CAV2P51636 162 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 RAB32Q13637 225 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 TEPPQ6URK8 271 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 GATAD1Q8WUU5 269 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 MARVELD1Q9BSK0 173 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 TMEM147Q9BVK8 224 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 SLC25A32Q9H2D1 315 aa13.79□□□□□ -0.2
TRIM56-202ENST00000412507 PRAF2O60831 178 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 DEDDO75618 318 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 SIX6O95475 246 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 LINC00869P0C866 280 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 PVALBP20472 110 aaPredicted RBP13.78□□□□□ -0.2
TRIM56-202ENST00000412507 SELENOTP62341 195 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 EWSR1Q01844 656 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIM56-202ENST00000412507 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 RARRES2Q99969 163 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 GGACTQ9BVM4 153 aa13.78□□□□□ -0.2
TRIM56-202ENST00000412507 SOCS3O14543 225 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 GOSR2O14653 212 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 CST7O76096 145 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 GIG44P09565 113 aaPredicted RBP13.77□□□□□ -0.21
TRIM56-202ENST00000412507 ID1P41134 155 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 LINC00052Q96N35 136 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 SCRT1Q9BWW7 348 aa13.77□□□□□ -0.21
TRIM56-202ENST00000412507 H3BRN7 92 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 HYPMO75409 117 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 OR5G3P0C626 314 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 SPP1P10451 314 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 C4BPBP20851 252 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 GALR1P47211 349 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 DEFB1P60022 68 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 PLP1P60201 277 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 RAP2BP61225 183 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 MORN3Q6PF18 240 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-202ENST00000412507 TMEM217Q8N7C4 229 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 RSG1Q9BU20 258 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 SLC25A39Q9BZJ4 359 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-202ENST00000412507 ARL6Q9H0F7 186 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-202ENST00000412507 HIGD1AQ9Y241 93 aa13.76□□□□□ -0.21
TRIM56-202ENST00000412507 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 AGPAT2O15120 278 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 S100A7P31151 101 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 PSMB3P49720 205 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 UHRF2Q96PU4 802 aa13.75□□□□□ -0.21
TRIM56-202ENST00000412507 H3BMM0 161 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 SULT1A1P50225 295 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 GDF5OSQ5U4N7 250 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 PATE2Q6UY27 113 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 GPR82Q96P67 336 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 MGST2Q99735 147 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 SHANK2-AS3Q9BTD1 123 aa13.74□□□□□ -0.21
TRIM56-202ENST00000412507 ISLRO14498 428 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
TRIM56-202ENST00000412507 MEOX2P50222 304 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms