RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ORM2P19652 201 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 CAMLGP49069 296 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 CD81P60033 236 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 Q5BKY6 102 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 Q6ZNX1 250 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 OR2T35Q8NGX2 323 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
TRAPPC12-203ENST00000411973 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 A8MZ25 164 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 S100A7P31151 101 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 RPL29P47914 159 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 AP2S1P53680 142 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 CLINT1Q14677 625 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 OR1B1Q8NGR6 318 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
TRAPPC12-203ENST00000411973 G3V3Q6 166 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 HYPMO75409 117 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 PRR20EP86478 221 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 PRR20CP86479 221 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 PRR20DP86480 221 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 PRR20BP86481 221 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 PRR20AP86496 221 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 ATP5SQ99766 215 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
TRAPPC12-203ENST00000411973 DNAH9Q9NYC9 4486 aa11.52□□□□□ -0.56
TRAPPC12-203ENST00000411973 TGP01266 2768 aa11.52□□□□□ -0.56
TRAPPC12-203ENST00000411973 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 ZNF98A6NK75 572 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 IGHV4-30-4P0DP06 118 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 FGF7P21781 194 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 OPCMLQ14982 345 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 SIGLEC15Q6ZMC9 328 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 S100A7AQ86SG5 101 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
TRAPPC12-203ENST00000411973 ELOA3CA0A087WX78 387 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 CMC4P56277 68 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 Q6ZRG5 221 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 WDR61Q9GZS3 305 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 ARV1Q9H2C2 271 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 DOK5Q9P104 306 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 TNFSF18Q9UNG2 199 aa11.51□□□□□ -0.57
TRAPPC12-203ENST00000411973 H3BRN7 92 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 K7EQG2 157 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 OR5G3P0C626 314 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 TFPI2P48307 235 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 STXBP6Q8NFX7 210 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 TMEM37Q8WXS4 190 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 GPR82Q96P67 336 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 B9D2Q9BPU9 175 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 PARD6GQ9BYG4 376 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 SMIM3Q9BZL3 60 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 SLC39A9Q9NUM3 307 aa11.5□□□□□ -0.57
TRAPPC12-203ENST00000411973 IFNA5P01569 189 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 B2MP61769 119 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 DEFB125Q8N687 156 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 INO80EQ8NBZ0 244 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 OR1L4Q8NGR5 311 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 DNAJC4Q9NNZ3 241 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 RNF24Q9Y225 148 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 PXMP4Q9Y6I8 212 aa11.49□□□□□ -0.57
TRAPPC12-203ENST00000411973 FXYD6-FXYD2A0A087WZ82 144 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 RNF222A6NCQ9 220 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 PFDN5Q99471 154 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 SCRT1Q9BWW7 348 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 TUBA4BQ9H853 241 aa11.48□□□□□ -0.57
TRAPPC12-203ENST00000411973 SLC25A22Q9H936 323 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms