RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 WDR83OSQ9Y284 106 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 HBG1P69891 147 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 HBG2P69892 147 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 ATP6V1FQ16864 119 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 DCANP1Q8TF63 244 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 ASCL2Q99929 193 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 SRD5A3Q9H8P0 318 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 MBD2Q9UBB5 411 aa16.63■□□□□ 0.25
PTCD3-203ENST00000409783 HUWE1Q7Z6Z7 4374 aaKnown RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 RBMY1BA6NDE4 496 aaKnown RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 RBMY1EA6NEQ0 496 aaKnown RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 HELTA6NFD8 242 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 K7EQG2 157 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 RBMY1DP0C7P1 496 aaKnown RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 LINC00869P0C866 280 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 PET100P0DJ07 73 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 ORM2P19652 201 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 NUP62P37198 522 aaPredicted RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 RPL11P62913 178 aaKnown RBP16.62■□□□□ 0.25
PTCD3-203ENST00000409783 PAFAH1B2P68402 229 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 WFDC3Q8IUB2 231 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 FAM24BQ8N5W8 94 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 TUBA4BQ9H853 241 aa16.62■□□□□ 0.25
PTCD3-203ENST00000409783 BAXQ07812 192 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 C1orf194Q5T5A4 169 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 SIGLEC15Q6ZMC9 328 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 ZNF546Q86UE3 836 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 STXBP6Q8NFX7 210 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 OR5C1Q8NGR4 320 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 OR1B1Q8NGR6 318 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 MAP6D1Q9H9H5 199 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 PFDN2Q9UHV9 154 aa16.61■□□□□ 0.25
PTCD3-203ENST00000409783 DNASE2O00115 360 aaPredicted RBP16.6■□□□□ 0.25
PTCD3-203ENST00000409783 AP2S1P53680 142 aaPredicted RBP16.6■□□□□ 0.25
PTCD3-203ENST00000409783 PATE2Q6UY27 113 aa16.6■□□□□ 0.25
PTCD3-203ENST00000409783 CHAC2Q8WUX2 184 aa16.6■□□□□ 0.25
PTCD3-203ENST00000409783 GGTLC1Q9BX51 225 aa16.6■□□□□ 0.25
PTCD3-203ENST00000409783 DOK5Q9P104 306 aa16.6■□□□□ 0.25
PTCD3-203ENST00000409783 UBE2L5PA0A1B0GUS4 154 aa16.59■□□□□ 0.25
PTCD3-203ENST00000409783 ZNF98A6NK75 572 aa16.59■□□□□ 0.25
PTCD3-203ENST00000409783 GIPP09681 153 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-203ENST00000409783 NHLRC4P0CG21 123 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-203ENST00000409783 CAMLGP49069 296 aa16.59■□□□□ 0.25
PTCD3-203ENST00000409783 HAGHQ16775 308 aa16.59■□□□□ 0.25
PTCD3-203ENST00000409783 Q5BKY6 102 aa16.59■□□□□ 0.25
PTCD3-203ENST00000409783 H3BRN7 92 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 HYPMO75409 117 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 RPL12P30050 165 aaKnown RBP16.58■□□□□ 0.24
PTCD3-203ENST00000409783 CMC4P56277 68 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PRR20EP86478 221 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PRR20CP86479 221 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PRR20DP86480 221 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PRR20BP86481 221 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PRR20AP86496 221 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 ZNF124Q15973 351 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 ASB13Q8WXK3 278 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 PPP1R14BQ96C90 147 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 SLC25A39Q9BZJ4 359 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-203ENST00000409783 ARL6Q9H0F7 186 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 HIGD1AQ9Y241 93 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 HSPB11Q9Y547 144 aa16.58■□□□□ 0.24
PTCD3-203ENST00000409783 OPCMLQ14982 345 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 MIC13Q5XKP0 118 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 APRG1Q8IVJ8 170 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 C17orf77Q96MU5 243 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 TM2D3Q9BRN9 247 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 SHANK2-AS3Q9BTD1 123 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 SCRT1Q9BWW7 348 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 SLC25A32Q9H2D1 315 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 NRN1Q9NPD7 142 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 FBXL17Q9UF56 701 aa16.57■□□□□ 0.24
PTCD3-203ENST00000409783 FGF7P21781 194 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 RAB31Q13636 194 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 CLINT1Q14677 625 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 PXDC1Q5TGL8 231 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 OR8I2Q8N0Y5 310 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 THAP6Q8TBB0 222 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 UHRF2Q96PU4 802 aa16.56■□□□□ 0.24
PTCD3-203ENST00000409783 OR5G3P0C626 314 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 RPL29P47914 159 aaKnown RBP16.55■□□□□ 0.24
PTCD3-203ENST00000409783 DEFB131AP59861 70 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 RAP2BP61225 183 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 LEMD1Q68G75 181 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 TMEM37Q8WXS4 190 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 ARV1Q9H2C2 271 aa16.55■□□□□ 0.24
PTCD3-203ENST00000409783 MPDU1O75352 247 aa16.54■□□□□ 0.24
PTCD3-203ENST00000409783 NPCDR1Q9BY65 106 aa16.54■□□□□ 0.24
PTCD3-203ENST00000409783 SLC25A22Q9H936 323 aa16.54■□□□□ 0.24
PTCD3-203ENST00000409783 TENM3Q9P273 2699 aa16.54■□□□□ 0.24
PTCD3-203ENST00000409783 G3V3Q6 166 aa16.53■□□□□ 0.24
PTCD3-203ENST00000409783 SOCS3O14543 225 aa16.53■□□□□ 0.24
PTCD3-203ENST00000409783 ZNF688P0C7X2 276 aa16.53■□□□□ 0.24
PTCD3-203ENST00000409783 ATP5SQ99766 215 aa16.53■□□□□ 0.24
PTCD3-203ENST00000409783 WDR61Q9GZS3 305 aaKnown RBP16.53■□□□□ 0.24
PTCD3-203ENST00000409783 SEPSECSQ9HD40 501 aaKnown RBP16.53■□□□□ 0.24
PTCD3-203ENST00000409783 AGRNO00468 2067 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 LOC102724200A0A096LPH7 203 aaPredicted RBP16.52■□□□□ 0.24
PTCD3-203ENST00000409783 S100A7P31151 101 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 FGL1Q08830 312 aa16.52■□□□□ 0.24
PTCD3-203ENST00000409783 GPR82Q96P67 336 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms