RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 USMG5Q96IX5 58 aa7.27□□□□□ -1.24
LIG4-202ENST00000405925 TBX15Q96SF7 602 aa7.27□□□□□ -1.24
LIG4-202ENST00000405925 SLC25A39Q9BZJ4 359 aaPredicted RBP7.27□□□□□ -1.24
LIG4-202ENST00000405925 HOXA3O43365 443 aaPredicted RBP7.27□□□□□ -1.25
LIG4-202ENST00000405925 COX19Q49B96 90 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 FAM209BQ5JX69 171 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 TRBV7-1A0A0A6YYK4 115 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 A0A1W2PRE2 83 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 ZNF98A6NK75 572 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 ISLRO14498 428 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 TSPOP30536 169 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 SRSF3P84103 164 aaKnown RBP7.27□□□□□ -1.25
LIG4-202ENST00000405925 LCNL1Q6ZST4 164 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 Q8N7P7 452 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 FAM110DQ8TAY7 271 aaPredicted RBP7.27□□□□□ -1.25
LIG4-202ENST00000405925 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 OVOL3O00110 214 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 IGLV1-47P01700 117 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 MEOX2P50222 304 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 LMO4P61968 165 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 LDLRAD2Q5SZI1 272 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 Q6ZPA2 131 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 TXN2Q99757 166 aa7.27□□□□□ -1.25
LIG4-202ENST00000405925 ACANP16112 2415 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 KRTDAPP60985 99 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 ZNF343Q6P1L6 599 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 PGLYRP4Q96LB8 373 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 FN1P02751 2386 aaKnown RBP7.26□□□□□ -1.25
LIG4-202ENST00000405925 A8MXK9 166 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 SFRP2Q96HF1 295 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 OTORQ9NRC9 128 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 PGPEP1LA6NFU8 196 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 GCGP01275 180 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 CD33P20138 364 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 SNRPEP62304 92 aaKnown RBP7.26□□□□□ -1.25
LIG4-202ENST00000405925 TWIST1Q15672 202 aa7.26□□□□□ -1.25
LIG4-202ENST00000405925 AMTP48728 403 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 TCF24Q7RTU0 167 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 GPR82Q96P67 336 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 PHLDA3Q9Y5J5 127 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 EXPH5Q8NEV8 1989 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 TNRC6BQ9UPQ9 1833 aaKnown RBP7.25□□□□□ -1.25
LIG4-202ENST00000405925 FAM223BA6NKX1 122 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 SLC17A3O00476 420 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 IL15RAQ13261 267 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 UTF1Q5T230 341 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 FAM159AQ6UWV7 190 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 FAM223AQ8IWN6 122 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 EXOC3-AS1Q8N2X6 119 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 PEF1Q9UBV8 284 aaKnown RBP7.25□□□□□ -1.25
LIG4-202ENST00000405925 EPDR1Q9UM22 224 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 PAX1P15863 534 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 TCF23Q7RTU1 214 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 C5orf30Q96GV9 206 aa7.25□□□□□ -1.25
LIG4-202ENST00000405925 WDFY4Q6ZS81 3184 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 FNDC10F2Z333 226 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 HAPLN4Q86UW8 402 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 TMEM116Q8NCL8 245 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 ZNF688P0C7X2 276 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 CGB3P0DN86 165 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 CGB7P0DN87 165 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 TAS2R60P59551 318 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 C11orf71Q6IPW1 123 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 RITA1Q96K30 269 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 BBC3Q96PG8 261 aaPredicted RBP7.24□□□□□ -1.25
LIG4-202ENST00000405925 MUC21A0A0G2JKD1 596 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 MUC21A0A140T8X8 626 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 IGLC7A0M8Q6 106 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 APCSP02743 223 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 NUTF2P61970 127 aaKnown RBP7.24□□□□□ -1.25
LIG4-202ENST00000405925 BATFQ16520 125 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 MUC21Q5SSG8 566 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 ZNF841Q6ZN19 808 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 TUBA4BQ9H853 241 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 VPREB3Q9UKI3 123 aa7.24□□□□□ -1.25
LIG4-202ENST00000405925 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 SEC14L6B5MCN3 397 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 SAP30O75446 220 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 TOMM40O96008 361 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 BLCAPP62952 87 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 TGIF2-C20orf24A0A0A6YYL0 155 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 PMS2P11Q13670 270 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 PSMG4Q5JS54 123 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 ODF3L1Q8IXM7 274 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 RHPN1-AS1Q9BWJ2 59 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 SIRPDQ9H106 197 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 SDF2L1Q9HCN8 221 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 CARHSP1Q9Y2V2 147 aaKnown RBP7.23□□□□□ -1.25
LIG4-202ENST00000405925 TRAV1-1A0A0B4J248 108 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 M0R3E3 92 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 PROP1O75360 226 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 TRGC2P03986 189 aa7.23□□□□□ -1.25
LIG4-202ENST00000405925 RPS20P60866 119 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms