RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 PRSS22Q9GZN4 317 aa18.33■□□□□ 0.53
RABGGTA-202ENST00000399409 RNF24Q9Y225 148 aa18.33■□□□□ 0.53
RABGGTA-202ENST00000399409 A8MWL6 223 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 NBR2O15453 112 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 KLRB1Q12918 225 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 KLF5Q13887 457 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 LEMD1Q68G75 181 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 NPBQ8NG41 125 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 VN1R17PQ8TDU5 208 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 CBLN4Q9NTU7 201 aa18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 SOX21Q9Y651 276 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-202ENST00000399409 ASPHD1Q5U4P2 390 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 C18orf32Q8TCD1 76 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 VAMP8Q9BV40 100 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 A0A1B0GXF2 115 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 C19orf71A6NCJ1 209 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 GDF5OSQ5U4N7 250 aa18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 MRPL52Q86TS9 123 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-202ENST00000399409 PIEZO2Q9H5I5 2752 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 NDUFA3O95167 84 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 IGKV1-17P01599 117 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 KRTDAPP60985 99 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 LDLRAD2Q5SZI1 272 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 NEU4Q8WWR8 484 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 CFHR4Q92496 578 aa18.31■□□□□ 0.52
RABGGTA-202ENST00000399409 TRBV6-1A0A0K0K1D8 114 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 K7EIM0 57 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 P01737 135 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 PMCHP20382 165 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 SGK494Q96LW2 274 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 GFRA4Q9GZZ7 299 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 BSNQ9UPA5 3926 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 M0R143 59 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 ARF6P62330 175 aa18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 DAZAP1Q96EP5 407 aaKnown RBP18.3■□□□□ 0.52
RABGGTA-202ENST00000399409 DIRC3C9JPN6 131 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 ADORA2A-AS1P86434 159 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 MIEN1Q9BRT3 115 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 SHANK2-AS3Q9BTD1 123 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 LOC105371242A0A075B767 164 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 H3BTX0 84 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 OR4B1Q8NGF8 309 aa18.29■□□□□ 0.52
RABGGTA-202ENST00000399409 FAM231BA6NCW3 169 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 ODF3BA8MYP8 253 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 EREGO14944 169 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 PRTN3P24158 256 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 HBBP68871 147 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 Q86TA4 180 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 Q8N976 141 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 LAMA5O15230 3695 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 C11orf71Q6IPW1 123 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 BPIFA4PQ86YQ2 179 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 ALKBH7Q9BT30 221 aaPredicted RBP18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 SNHG12Q9BXW3 62 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 HILPDAQ9Y5L2 63 aa18.28■□□□□ 0.52
RABGGTA-202ENST00000399409 H3BRN7 92 aa18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 HOXB4P17483 251 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 LINC00322Q6ZN03 302 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 S100A7AQ86SG5 101 aa18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 NIT1Q86X76 327 aa18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 RNF114Q9Y508 228 aa18.27■□□□□ 0.52
RABGGTA-202ENST00000399409 ATMQ13315 3056 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 RAB4AP20338 218 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 CAMPP49913 170 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 TDRG1Q3Y452 100 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 LYPD1Q8N2G4 141 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 OR4F17Q8NGA8 305 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 TRAV30A0A087WSZ9 112 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 VWC2LB2RUY7 222 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 FAM162BQ5T6X4 162 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 TCF24Q7RTU0 167 aa18.26■□□□□ 0.51
RABGGTA-202ENST00000399409 NPIPB6E9PJ23 425 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 GPR6P46095 362 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 ZNF705AQ6ZN79 300 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 RBPMS2Q6ZRY4 209 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 C1orf122Q6ZSJ8 110 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 BORCS7Q96B45 105 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 PAM16Q9Y3D7 125 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 PTPRQQ9UMZ3 2332 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 TRBV19A0A075B6N1 114 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 M0QZK8 103 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 LY6HO94772 140 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 C5orf64Q2M2E5 130 aa18.25■□□□□ 0.51
RABGGTA-202ENST00000399409 CDSNQ15517 529 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 NPIPB5A8MRT5 1133 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 NUTF2P61970 127 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 CCDC144NLQ6NUI1 221 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 GOLT1AQ6ZVE7 132 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 ZNF491Q8N8L2 437 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 GTSF1Q8WW33 167 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 RNF125Q96EQ8 232 aa18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 ZNF48Q96MX3 618 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-202ENST00000399409 WI2-2373I1.2A0A1W2PRP0 233 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 OOSP1A8MZH6 123 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 IGLV2-11P01706 119 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 KLRD1Q13241 179 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 EXOC3-AS1Q8N2X6 119 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 KIR3DL3Q8N743 410 aa18.23■□□□□ 0.51
RABGGTA-202ENST00000399409 SSBP4Q9BWG4 385 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms