RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GSX1Q9H4S2 264 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-202ENST00000398417 A0A1B0GWJ7 208 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 A6NED7 52 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 IGKV3-15P01624 115 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 SRIP30626 198 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 GPR183P32249 361 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 RPL27AP46776 148 aaKnown RBP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ACTL10Q5JWF8 245 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 TIMM23BQ5SRD1 257 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 KIR3DL3Q8N743 410 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 RPEQ96AT9 228 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 PERPQ96FX8 193 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF586Q9NXT0 402 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 BOD1L1Q8NFC6 3051 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 SERTAD4-AS1Q5TG53 156 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ATP5L2Q7Z4Y8 100 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 FAM57AQ8TBR7 257 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 BAALCQ8WXS3 180 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF48Q96MX3 618 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 SFXN3Q9BWM7 321 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 SPANXA1Q9NS26 97 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ELOVL5Q9NYP7 299 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 TECTAO75443 2155 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 RBFOX2O43251 390 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 MGPP08493 103 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 GLRXP35754 106 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM177Q53S58 311 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 M0R143 59 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 DLX1P56177 255 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 LCN12Q6JVE5 192 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 DYNLRB2Q8TF09 96 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM106BQ9NUM4 274 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 RPUSD1Q9UJJ7 312 aaKnown RBP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 CSPG4Q6UVK1 2322 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 AMY1AP04745 511 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 LCN2P80188 198 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 CD69Q07108 199 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 BEX4Q9NWD9 120 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-202ENST00000398417 LOC105371242A0A075B767 164 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 PPIAL4CA0A0B4J2A2 164 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 IGHV3-23P01764 117 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 PRCDQ00LT1 54 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 IGFBPL1Q8WX77 278 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 OBSL1O75147 1896 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 F2RL2O00254 374 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 PAX5Q02548 391 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 WFDC3Q8IUB2 231 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 RAXQ9Y2V3 346 aa4.03□□□□□ -1.76
SMAD4-202ENST00000398417 ATG2AQ2TAZ0 1938 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3OR16-12A0A075B7B8 117 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 DIRC3C9JPN6 131 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 RPL8P62917 257 aaKnown RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 SRSF8Q9BRL6 282 aaKnown RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 SLC25A33Q9BSK2 321 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 RPL15P61313 204 aaKnown RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 PYGO2Q9BRQ0 406 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 DKK4Q9UBT3 224 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 TRAV8-6A0A0B4J262 113 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 MBD3L4A6NDZ8 208 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 MBD3L3A6NE82 208 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 MBD3L5A6NJ08 208 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 FAM87AP0C7U9 286 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 CEACAM3P40198 252 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 HERV-K104P63124 156 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM144Q7Z5S9 345 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 MBD3L2Q8NHZ7 208 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 PGLYRP4Q96LB8 373 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 FAM215AQ9Y5M1 114 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 VPS13CQ709C8 3753 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 NUP210LQ5VU65 1888 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 F2Z2F3 143 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 K7EN84 100 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 IGLV1-44P01699 117 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 RNASE2P10153 161 aaKnown RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 PNKDQ8N490 385 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 TXNDC17Q9BRA2 123 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 NDUFAF3Q9BU61 184 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 SSBP4Q9BWG4 385 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 POLR3KQ9Y2Y1 108 aaPredicted RBP4.02□□□□□ -1.77
SMAD4-202ENST00000398417 MORN5Q5VZ52 161 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM200BQ69YZ2 307 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 DGAT2L7PQ6IED9 249 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 ABHD17AQ96GS6 310 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 LINC00479Q96M42 142 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 LPAR2Q9HBW0 351 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 ATMQ13315 3056 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 VCYO14598 125 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 HYPMO75409 117 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 WNT2P09544 360 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM186Q96B77 213 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 HIGD1AQ9Y241 93 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 CYSLTR1Q9Y271 337 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms