RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 IL5P05113 134 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 GATA2P23769 480 aaPredicted RBP12.84□□□□□ -0.35
UPK3A-202ENST00000396082 DLK1P80370 383 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 TRPT1Q86TN4 253 aaKnown RBP12.84□□□□□ -0.35
UPK3A-202ENST00000396082 TMEM217Q8N7C4 229 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 RARRES2Q99969 163 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 AGRNO00468 2067 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 DNAH7Q8WXX0 4024 aa12.84□□□□□ -0.35
UPK3A-202ENST00000396082 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 SPP1P10451 314 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 ID1P41134 155 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 BCAP31P51572 246 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
UPK3A-202ENST00000396082 GSG1LQ6UXU4 331 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 CYP2G1PQ6ZSU1 146 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
UPK3A-202ENST00000396082 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
UPK3A-202ENST00000396082 PVALBP20472 110 aaPredicted RBP12.82□□□□□ -0.36
UPK3A-202ENST00000396082 GALR1P47211 349 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 S100A10P60903 97 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 PMS2P11Q13670 270 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 TMEM182Q6ZP80 229 aaPredicted RBP12.82□□□□□ -0.36
UPK3A-202ENST00000396082 OR11H2Q8NH07 326 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 C2orf50Q96LR7 162 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 GPN1Q9HCN4 374 aaPredicted RBP12.82□□□□□ -0.36
UPK3A-202ENST00000396082 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 DOK5Q9P104 306 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 SLC45A2Q9UMX9 530 aa12.82□□□□□ -0.36
UPK3A-202ENST00000396082 KMT2CQ8NEZ4 4911 aaKnown RBP12.82□□□□□ -0.36
UPK3A-202ENST00000396082 CXorf65A6NEN9 183 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 ZNF98A6NK75 572 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 K7EPK0 472 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 LINC00869P0C866 280 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 CAV2P51636 162 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 RAP2BP61225 183 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 TMEM41BQ5BJD5 291 aa12.81□□□□□ -0.36
UPK3A-202ENST00000396082 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 PSMB3P49720 205 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 SELENOTP62341 195 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 SLC25A32Q9H2D1 315 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
UPK3A-202ENST00000396082 OR5G3P0C626 314 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 C4BPBP20851 252 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 MEOX2P50222 304 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 DEFA1P59665 94 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 DEFA3P59666 94 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
UPK3A-202ENST00000396082 SLC38A11Q08AI6 406 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 GGACTQ9BVM4 153 aa12.79□□□□□ -0.36
UPK3A-202ENST00000396082 HYPMO75409 117 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 IFITM3Q01628 133 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 EWSR1Q01844 656 aaKnown RBP eCLIP12.78□□□□□ -0.36
UPK3A-202ENST00000396082 ARL16Q0P5N6 197 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 NRARPQ7Z6K4 114 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 C16orf92Q96LL3 132 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 GPR82Q96P67 336 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 RSG1Q9BU20 258 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
UPK3A-202ENST00000396082 LCE6AA0A183 80 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 H3BRN7 92 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 ISLRO14498 428 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 GOSR2O14653 212 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 DEDDO75618 318 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 JTBO76095 146 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 CST7O76096 145 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 HLA-DRB4P13762 266 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
UPK3A-202ENST00000396082 RAB32Q13637 225 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
UPK3A-202ENST00000396082 ARL6Q9H0F7 186 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 CLEC5AQ9NY25 188 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
UPK3A-202ENST00000396082 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 INMT-MINDY4F8WBC2 141 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 H3BMM0 161 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 SOCS3O14543 225 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 PRAF2O60831 178 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 PLP1P60201 277 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 FGL1Q08830 312 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 STX12Q86Y82 276 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
UPK3A-202ENST00000396082 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
UPK3A-202ENST00000396082 AGPAT2O15120 278 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 DEFB4AO15263 64 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 IGKV3-20P01619 116 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
UPK3A-202ENST00000396082 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
UPK3A-202ENST00000396082 DEFB1P60022 68 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms