RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NDPQ00604 133 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 TRAV21A0A0B4J279 112 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 FAM223BA6NKX1 122 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 MSMBP08118 114 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 CXCL1P09341 107 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 CFHR2P36980 270 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 FAM223AQ8IWN6 122 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 C11orf53Q8IXP5 236 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 OVOL1O14753 267 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 SPRNQ5BIV9 151 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 SLC25A34Q6PIV7 304 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 RNF223E7ERA6 249 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 SERF1AO75920 110 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 LGALS3P17931 250 aaKnown RBP13.41□□□□□ -0.26
SCN3B-202ENST00000392770 DKK4Q9UBT3 224 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 DENND4AQ7Z401 1863 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 GRNP28799 593 aaKnown RBP13.4□□□□□ -0.26
SCN3B-202ENST00000392770 PPIFP30405 207 aaKnown RBP13.4□□□□□ -0.26
SCN3B-202ENST00000392770 ZNF414Q96IQ9 312 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 DMRT1Q9Y5R6 373 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 MMP23AO75900 390 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 DUSP14O95147 198 aaKnown RBP13.4□□□□□ -0.26
SCN3B-202ENST00000392770 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 TCRAP04437 139 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 PPP1R17O96001 155 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 CD33P20138 364 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 LINC01551Q86U37 167 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 GNB1LQ9BYB4 327 aa13.4□□□□□ -0.26
SCN3B-202ENST00000392770 SOD3P08294 240 aa13.39□□□□□ -0.27
SCN3B-202ENST00000392770 GZMBP10144 247 aa13.39□□□□□ -0.27
SCN3B-202ENST00000392770 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
SCN3B-202ENST00000392770 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
SCN3B-202ENST00000392770 ZNF329Q86UD4 541 aa13.39□□□□□ -0.27
SCN3B-202ENST00000392770 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 MST1LQ2TV78 715 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 MAPK1IP1LQ8NDC0 245 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 OR5AN1Q8NGI8 311 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BKO60814 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BJP06899 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BOP23527 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BBP33778 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BDP58876 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BCP62807 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST2H2BEQ16778 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-202ENST00000392770 LINC00311Q8N616 119 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BHQ93079 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 RAB37Q96AX2 223 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BNQ99877 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H2BMQ99879 126 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 IGKV3OR2-268A0A0C4DH90 116 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 COLCA2A8K830 154 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 DIAPH2-AS1Q14236 149 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 SPTA1P02549 2419 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 CACNG7P62955 275 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 OR10J3Q5JRS4 329 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
SCN3B-202ENST00000392770 IGHV1-69DA0A0B4J2H0 117 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 IGHV1-69P01742 117 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 ATP6V0E1O15342 81 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 TMEM50AO95807 157 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 Q5PR19 223 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 Q8NFD4 153 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 SCGB3A1Q96QR1 104 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 HIST1H4GQ99525 98 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
SCN3B-202ENST00000392770 IGFL4Q6B9Z1 124 aa13.37□□□□□ -0.27
SCN3B-202ENST00000392770 EMP1P54849 157 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 Q6ZSR3 168 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 ZNF562Q6V9R5 426 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 ADCYAP1P18509 176 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 GCSHP23434 173 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
SCN3B-202ENST00000392770 FOXC2Q99958 501 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 GPR179Q6PRD1 2367 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 C12orf54Q6X4T0 127 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 TPSG1Q9NRR2 321 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 ZNF407Q9C0G0 2248 aa13.36□□□□□ -0.27
SCN3B-202ENST00000392770 TMEM238LA0A1B0GVL6 79 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 A6NJY4 79 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 PSG3Q16557 428 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 ATP5L2Q7Z4Y8 100 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 H3BVH4 76 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 GATA3P23771 443 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
SCN3B-202ENST00000392770 FAM110DQ8TAY7 271 aaPredicted RBP13.35□□□□□ -0.27
SCN3B-202ENST00000392770 MIEN1Q9BRT3 115 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 TMEM262E9PQX1 116 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 PMCHL2Q9BQD1 86 aa13.35□□□□□ -0.27
SCN3B-202ENST00000392770 TRBV24-1A0A075B6N3 115 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 ATP5LO75964 103 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 FOXL1Q12952 345 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 PAPPA-AS1Q5QFB9 102 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 SHANK2-AS3Q9BTD1 123 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms