RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ORM2P19652 201 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
SNRPB-201ENST00000381342 TFPI2P48307 235 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 SELENOTP62341 195 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 GBGT1Q8N5D6 347 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 OR1B1Q8NGR6 318 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 PPP1R14BQ96C90 147 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 GRAMD2BQ96HH9 432 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
SNRPB-201ENST00000381342 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
SNRPB-201ENST00000381342 FGF7P21781 194 aa12.09□□□□□ -0.47
SNRPB-201ENST00000381342 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
SNRPB-201ENST00000381342 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
SNRPB-201ENST00000381342 OR2T35Q8NGX2 323 aa12.09□□□□□ -0.47
SNRPB-201ENST00000381342 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
SNRPB-201ENST00000381342 SLC45A2Q9UMX9 530 aa12.09□□□□□ -0.47
SNRPB-201ENST00000381342 OR4C46A6NHA9 309 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 BUB3O43684 328 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 NUP62P37198 522 aaPredicted RBP12.08□□□□□ -0.48
SNRPB-201ENST00000381342 CAMLGP49069 296 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 FGL1Q08830 312 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 SMIM3Q9BZL3 60 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
SNRPB-201ENST00000381342 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 G3V3Q6 166 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 CD5P06127 495 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 FRMD6-AS1P0C7T7 363 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 IGHV4-30-4P0DP06 118 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 CD300CQ08708 224 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 RAB31Q13636 194 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 WFDC3Q8IUB2 231 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 STXBP6Q8NFX7 210 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 ATP5SQ99766 215 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 TUBA4BQ9H853 241 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
SNRPB-201ENST00000381342 OR5G3P0C626 314 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 PLP1P60201 277 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 OPCMLQ14982 345 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 ODF3L2Q3SX64 289 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 MIC13Q5XKP0 118 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 LEMD1Q68G75 181 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 DEFB125Q8N687 156 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 UHRF2Q96PU4 802 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 C19orf73Q9NVV2 129 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 PFDN2Q9UHV9 154 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
SNRPB-201ENST00000381342 HELTA6NFD8 242 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 OR11H12B2RN74 326 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 SMLR1H3BR10 107 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 H3BRN7 92 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
SNRPB-201ENST00000381342 HYPMO75409 117 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PAFAH1B2P68402 229 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PRR20EP86478 221 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PRR20CP86479 221 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PRR20DP86480 221 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PRR20BP86481 221 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PRR20AP86496 221 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 SBSPONQ8IVN8 264 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 FAM24BQ8N5W8 94 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 SLC25A32Q9H2D1 315 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
SNRPB-201ENST00000381342 ZNF98A6NK75 572 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 MPDU1O75352 247 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 C1QBP02746 253 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 SLC25A39Q9BZJ4 359 aaPredicted RBP12.04□□□□□ -0.48
SNRPB-201ENST00000381342 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
SNRPB-201ENST00000381342 ARV1Q9H2C2 271 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 WFDC1Q9HC57 220 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
SNRPB-201ENST00000381342 TRAV2A0A0B4J234 112 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 K7EQG2 157 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
SNRPB-201ENST00000381342 B2MP61769 119 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 ZFP69Q49AA0 526 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 PXDC1Q5TGL8 231 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 OR8I2Q8N0Y5 310 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 SHANK2-AS3Q9BTD1 123 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 SLC39A9Q9NUM3 307 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 TNFSF18Q9UNG2 199 aa12.03□□□□□ -0.48
SNRPB-201ENST00000381342 RNF222A6NCQ9 220 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 A8MZ25 164 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 RCHY1Q96PM5 261 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms