RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
HMGN1-203ENST00000380748 PFDN2Q9UHV9 154 aa11.92□□□□□ -0.5
HMGN1-203ENST00000380748 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 FAM229AH3BQW9 127 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 EREGO14944 169 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 DNAH10OSP0CZ25 163 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 RCVRNP35243 200 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 B2MP61769 119 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 SPARTQ8N0X7 666 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
HMGN1-203ENST00000380748 IFNA5P01569 189 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 M6PRP20645 277 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 LYZP61626 148 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 ZNF90Q03938 601 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 OR8I2Q8N0Y5 310 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 SAMD12Q8N8I0 201 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
HMGN1-203ENST00000380748 TIMM8BQ9Y5J9 83 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-203ENST00000380748 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 CEBPZOSA8MTT3 80 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 ZNF701M0R085 212 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-203ENST00000380748 UCP1P25874 307 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 PPP1R14BQ96C90 147 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-203ENST00000380748 LINC01587Q99440 93 aa11.89□□□□□ -0.51
HMGN1-203ENST00000380748 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
HMGN1-203ENST00000380748 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-203ENST00000380748 HTN1P15515 57 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 HOXA5P20719 270 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 KLF9Q13886 244 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-203ENST00000380748 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 GPR141Q7Z602 305 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-203ENST00000380748 CACNG5Q9UF02 275 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 TNFRSF18Q9Y5U5 241 aa11.88□□□□□ -0.51
HMGN1-203ENST00000380748 ZFP92A6NM28 416 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
HMGN1-203ENST00000380748 MEOX2P50222 304 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 TAS2R60P59551 318 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
HMGN1-203ENST00000380748 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 SLC25A32Q9H2D1 315 aa11.87□□□□□ -0.51
HMGN1-203ENST00000380748 BOLA2-SMG1P6H3BVE0 249 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 TMEM127O75204 238 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 TGFBR1P36897 503 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 OR2F1Q13607 317 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 SNX29P2Q8IUI4 249 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 FAM219AQ8IW50 185 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 ARRDC1Q8N5I2 433 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 RSG1Q9BU20 258 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
HMGN1-203ENST00000380748 A0A087WTM6 91 aa11.85□□□□□ -0.51
HMGN1-203ENST00000380748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.85□□□□□ -0.51
HMGN1-203ENST00000380748 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
HMGN1-203ENST00000380748 TMEM256Q8N2U0 113 aa11.85□□□□□ -0.51
HMGN1-203ENST00000380748 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
HMGN1-203ENST00000380748 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
HMGN1-203ENST00000380748 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 GALR1P47211 349 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 GAMTQ14353 236 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 MEF2DQ14814 521 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 NOXA1Q86UR1 476 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
HMGN1-203ENST00000380748 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 H3BNG1 76 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 CDS2O95674 445 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 ZNF182P17025 639 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-203ENST00000380748 GCSHP23434 173 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 CCDC71LQ8N9Z2 235 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 TMEM263Q8WUH6 116 aaKnown RBP11.83□□□□□ -0.52
HMGN1-203ENST00000380748 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
HMGN1-203ENST00000380748 A0A096LPF7 62 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-203ENST00000380748 SIVA1O15304 175 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 GAGE7O76087 117 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 CROCCP3Q8IVE0 287 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 OR13C8Q8NGS7 320 aa11.82□□□□□ -0.52
HMGN1-203ENST00000380748 RBPMSQ93062 196 aaKnown RBP11.82□□□□□ -0.52
HMGN1-203ENST00000380748 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
HMGN1-203ENST00000380748 FABP1P07148 127 aa11.81□□□□□ -0.52
HMGN1-203ENST00000380748 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-203ENST00000380748 RPS19P39019 145 aaKnown RBP11.81□□□□□ -0.52
HMGN1-203ENST00000380748 RHOBP62745 196 aa11.81□□□□□ -0.52
HMGN1-203ENST00000380748 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms