RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
EXT1-201ENST00000378204 GDF15Q99988 308 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 TRGV2A0A075B6R0 118 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 TGFBR3LH3BV60 316 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 ATP5L2Q7Z4Y8 100 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 DNAJC30Q96LL9 226 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 H3BMM0 161 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 LINC00271P0C7V0 271 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 EVI2AP22794 236 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
EXT1-201ENST00000378204 WBP1Q96G27 269 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 SAA1P0DJI8 122 aaPredicted RBP12.43□□□□□ -0.42
EXT1-201ENST00000378204 FOXL1Q12952 345 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 C18orf12Q96KH6 178 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 SAA2-SAA4A0A096LPE2 208 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 SAA2P0DJI9 122 aaPredicted RBP12.43□□□□□ -0.42
EXT1-201ENST00000378204 MORN2Q502X0 79 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
EXT1-201ENST00000378204 IGLV3-12A0A075B6K2 115 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 PPBPP02775 128 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 MGAMO43451 1857 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
EXT1-201ENST00000378204 PVRIGQ6DKI7 326 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 A0A1B0GW64 132 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 VWC2LB2RUY7 222 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 UPK2O00526 184 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 INAFM2P0DMQ5 153 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 REG4Q9BYZ8 158 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
EXT1-201ENST00000378204 MED13Q9UHV7 2174 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 TRAV14DV4A0A0A6YYC5 116 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 CD7P09564 240 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 FBLN5Q9UBX5 448 aa12.42□□□□□ -0.42
EXT1-201ENST00000378204 GATA2P23769 480 aaPredicted RBP12.41□□□□□ -0.42
EXT1-201ENST00000378204 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
EXT1-201ENST00000378204 RNF126Q9BV68 326 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 K7EP34 96 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
EXT1-201ENST00000378204 TMEM167AQ8TBQ9 72 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 RBM3P98179 157 aaKnown RBP12.41□□□□□ -0.42
EXT1-201ENST00000378204 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.42
EXT1-201ENST00000378204 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 KLF17Q5JT82 389 aaPredicted RBP12.41□□□□□ -0.42
EXT1-201ENST00000378204 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
EXT1-201ENST00000378204 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 STHQ8IWL8 128 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 FREM1Q5H8C1 2179 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 C9JAW5 83 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 MALP21145 153 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 CCL3L1P16619 93 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
EXT1-201ENST00000378204 NCKAP5O14513 1909 aa12.4□□□□□ -0.43
EXT1-201ENST00000378204 CD55P08174 381 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 CCL1P22362 96 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 MPZP25189 248 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 ORMDL2Q53FV1 153 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 MRPL27Q9P0M9 148 aaKnown RBP12.39□□□□□ -0.43
EXT1-201ENST00000378204 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 MALRD1Q5VYJ5 2156 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 SELENOKQ9Y6D0 94 aa12.39□□□□□ -0.43
EXT1-201ENST00000378204 IGLV3-32A0A0A0MS00 114 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
EXT1-201ENST00000378204 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
EXT1-201ENST00000378204 IGHV3-11P01762 117 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 PRSS22Q9GZN4 317 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 V9GYY9 64 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 F2Z2F3 143 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 VDAC2P45880 294 aaPredicted RBP12.38□□□□□ -0.43
EXT1-201ENST00000378204 TMEM42Q69YG0 159 aa12.38□□□□□ -0.43
EXT1-201ENST00000378204 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
EXT1-201ENST00000378204 SYS1-DBNDD2H3BUS1 97 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 SELLP14151 372 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 NAPSAO96009 420 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 RLFQ13129 1914 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 hDV102S1A0JD36 115 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 ETDBQ3ZM63 59 aa12.37□□□□□ -0.43
EXT1-201ENST00000378204 EFNB3Q15768 340 aa12.36□□□□□ -0.43
EXT1-201ENST00000378204 UTF1Q5T230 341 aa12.36□□□□□ -0.43
EXT1-201ENST00000378204 GLMPQ8WWB7 406 aa12.36□□□□□ -0.43
EXT1-201ENST00000378204 TOMM40O96008 361 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms