RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 FBN2P35556 2912 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 HIST1H1EP10412 219 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 CX3CL1P78423 397 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 RASL11AQ6T310 242 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 SLC25A39Q9BZJ4 359 aaPredicted RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 MRPL27Q9P0M9 148 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 ARHGAP32A7KAX9 2087 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 SMIM27A0A1W2PRY6 76 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 NCBP2LA6PVI3 153 aaKnown RBP11.08□□□□□ -0.64
USF1-202ENST00000368020 SLC17A3O00476 420 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 NDUFS7O75251 213 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 IGKV1-17P01599 117 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 MFAP4P55083 255 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
USF1-202ENST00000368020 OR5I1Q13606 314 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 LYPD1Q8N2G4 141 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
USF1-202ENST00000368020 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 PGPA6NDG6 321 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 GNG7O60262 68 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 LMO4P61968 165 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 BPIFA4PQ86YQ2 179 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 GPR82Q96P67 336 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 TXN2Q99757 166 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
USF1-202ENST00000368020 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
USF1-202ENST00000368020 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 ZNF705GA8MUZ8 300 aaPredicted RBP11.06□□□□□ -0.64
USF1-202ENST00000368020 NDUFS8O00217 210 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 ATP5J2P56134 94 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 PYY3Q5JQD4 70 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 OR4F17Q8NGA8 305 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 BLNKQ8WV28 456 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 NRGNQ92686 78 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 ITPR2Q14571 2701 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 H3BRN7 92 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
USF1-202ENST00000368020 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 RNF125Q96EQ8 232 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
USF1-202ENST00000368020 Q9H3A6 140 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 GSN-AS1Q9NRJ2 163 aa11.06□□□□□ -0.64
USF1-202ENST00000368020 A0A1W2PRD5 423 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 A0A1W2PRF3 423 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 A0A1W2PRM7 423 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 WI2-2373I1.2A0A1W2PRP0 233 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
USF1-202ENST00000368020 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 HIST2H2BCQ6DN03 193 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 LRRC75A-AS1Q8N1F1 130 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 OR5R1Q8NH85 324 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 GRAMD2BQ96HH9 432 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
USF1-202ENST00000368020 SERTAD4Q9NUC0 356 aa11.05□□□□□ -0.64
USF1-202ENST00000368020 TRBV6-1A0A0K0K1D8 114 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 IZUMO1RA6ND01 250 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 K7EQM0 130 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 AMBPP02760 352 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 TCRAP04437 139 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 AMY1AP04745 511 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 ADMP35318 185 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 DSCR9P59020 149 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 PDE6HQ13956 83 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 CT83Q5H943 113 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 VN1R17PQ8TDU5 208 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 SNURFLB1AK76 121 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 LTAP01374 205 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 CD24P25063 80 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 IER3P46695 156 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 USF2Q15853 346 aaPredicted RBP11.04□□□□□ -0.64
USF1-202ENST00000368020 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 GBGT1Q8N5D6 347 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 WIPF2Q8TF74 440 aaPredicted RBP11.04□□□□□ -0.64
USF1-202ENST00000368020 FAM103A1Q9BTL3 118 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms