RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GP9P14770 177 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 ATF4P18848 351 aaPredicted RBP11.68□□□□□ -0.54
NEK2-201ENST00000366998 CRYBB3P26998 211 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 IER3P46695 156 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 RNF212Q495C1 297 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 TUBA4BQ9H853 241 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 TRGV3P03979 118 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
NEK2-201ENST00000366998 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 Q6ZS46 218 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 OR5R1Q8NH85 324 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 ELOVL1Q9BW60 279 aa11.67□□□□□ -0.54
NEK2-201ENST00000366998 AURKAIP1Q9NWT8 199 aaPredicted RBP11.67□□□□□ -0.54
NEK2-201ENST00000366998 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
NEK2-201ENST00000366998 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 TEX15Q9BXT5 2789 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 COLCA2A8K830 154 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 H3BTX0 84 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 AP4M1O00189 453 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 CLEC3BP05452 202 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 ADMP35318 185 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 RANP62826 216 aaKnown RBP11.66□□□□□ -0.54
NEK2-201ENST00000366998 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
NEK2-201ENST00000366998 TRBV7-1A0A0A6YYK4 115 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 MT-ND4LP03901 98 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 HNF1AP20823 631 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 RPL35P42766 123 aaKnown RBP11.66□□□□□ -0.54
NEK2-201ENST00000366998 TPPP2P59282 170 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 FAM24BQ8N5W8 94 aa11.66□□□□□ -0.54
NEK2-201ENST00000366998 TRBV20OR9-2A0A075B6H5 130 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 ZNF329Q86UD4 541 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
NEK2-201ENST00000366998 HELTA6NFD8 242 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 CLDN34H7C241 214 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 ZNF343Q6P1L6 599 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 Q6YL49 198 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 VPREB3Q9UKI3 123 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 PDZD2O15018 2839 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 CCDC168Q8NDH2 2452 aa11.64□□□□□ -0.55
NEK2-201ENST00000366998 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 PGPA6NDG6 321 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 CXorf65A6NEN9 183 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 TGOLN2O43493 480 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
NEK2-201ENST00000366998 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
NEK2-201ENST00000366998 PF4V1P10720 104 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 PPIFP30405 207 aaKnown RBP11.63□□□□□ -0.55
NEK2-201ENST00000366998 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 H3BUA1 57 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 H7BYZ3 331 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 BMPR1BO00238 502 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 GNG4P50150 75 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 TMEM95Q3KNT9 176 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 FOXC2Q99958 501 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
NEK2-201ENST00000366998 C9JCJ5 164 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 PEX7O00628 323 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 HOXA3O43365 443 aaPredicted RBP11.62□□□□□ -0.55
NEK2-201ENST00000366998 GNG5P63218 68 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 TOMM20LQ6UXN7 152 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 OCC1Q8TAD7 63 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 Q9H3A6 140 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 TMEM242Q9NWH2 141 aa11.62□□□□□ -0.55
NEK2-201ENST00000366998 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
NEK2-201ENST00000366998 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 PPP5D1E7EU14 171 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 CRYBA1P05813 215 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 MYCNOSP40205 109 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 ELOBQ15370 118 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 YPEL4Q96NS1 127 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 TCEAL7Q9BRU2 100 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 ITPR2Q14571 2701 aa11.61□□□□□ -0.55
NEK2-201ENST00000366998 FLNAP21333 2647 aaKnown RBP11.6□□□□□ -0.55
NEK2-201ENST00000366998 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms