RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 MUC21A0A140T8X8 626 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 PAX1P15863 534 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 CD33P20138 364 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 FAM3BP58499 235 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 SSBP2P81877 361 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 MUC21Q5SSG8 566 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 HSPB9Q9BQS6 159 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 FNDC4Q9H6D8 234 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 H0Y8G0 127 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 HIST1H1AQ02539 215 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
PCDH11X-202ENST00000361655 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 OVOL3O00110 214 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 P01737 135 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 CTRB1P17538 263 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 MFAP2P55001 183 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 RNF212Q495C1 297 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 TMEM78Q5T7P6 136 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 HIST2H2BDQ6DRA6 164 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 CTRB2Q6GPI1 263 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 ZNF295-AS1Q8N0V1 137 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 EXOC3-AS1Q8N2X6 119 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 KLHL30-AS1Q8NEE0 82 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 OR2D3Q8NGH3 330 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 C8orf46Q8TAG6 207 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 CHRDL1Q9BU40 450 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SAMD10Q9BYL1 202 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 LRBAP50851 2863 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 LOC102723971A0A1B0GUV8 181 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 FAM74A7A6NL05 159 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 HLA-DRB1P01911 266 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 LYL1P12980 280 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SRSF2Q01130 221 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 FAM74A3Q4VXF1 159 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 TEX38Q6PEX7 206 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 COL27A1Q8IZC6 1860 aaPredicted RBP4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SGMS2Q8NHU3 365 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 ST6GALNAC6Q969X2 333 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 MRPL32Q9BYC8 188 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 IGLC7A0M8Q6 106 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SYNJ2BPP57105 145 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 NAT8BQ9UHF3 227 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 IGHV7-81A0A0B4J1V7 117 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SRP19P09132 144 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 NTF3P20783 257 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 CENPWQ5EE01 88 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 LY6G5BQ8NDX9 201 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 C19orf24Q9BVV8 132 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 SLC25A39Q9BZJ4 359 aaPredicted RBP4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 Q9H3A6 140 aa4.36□□□□□ -1.71
PCDH11X-202ENST00000361655 XKRY2A2RUG3 117 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 J3QLI3 93 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 M0R3E3 92 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 SLC17A3O00476 420 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 FGF16O43320 207 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 HIST1H1EP10412 219 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 ID1P41134 155 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 POU2AF1Q16633 256 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 Q8N9W7 124 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 OR10J6PQ8NGY7 276 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 FAM210BQ96KR6 192 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 UFC1Q9Y3C8 167 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 ZNF98A6NK75 572 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 F5H697 171 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 DEFB136Q30KP8 78 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 ZNF343Q6P1L6 599 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 EBLN2Q6P2I7 272 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 C11orf42Q8N5U0 333 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 C8orf31Q8N9H6 132 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 JMJD8Q96S16 334 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 SMR3AQ99954 134 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 DERL1Q9BUN8 251 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 TRAV8-1A0A0A6YYK1 113 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 FCN3O75636 299 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 AVPP01185 164 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 IGLV2-23P01705 113 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 CSN3P07498 182 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 CD99P14209 185 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 PNRC1Q12796 327 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 PRR31Q5SQ13 230 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 IBA57Q5T440 356 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 C5orf17Q8NAS9 161 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 LINC00479Q96M42 142 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 ELOVL1Q9BW60 279 aa4.35□□□□□ -1.71
PCDH11X-202ENST00000361655 STAG3L2P0CL84 134 aa4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 STAG3L3P0CL85 134 aa4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 IGHV4-31P0DP07 118 aa4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 IER3P46695 156 aa4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 CIARTQ8N365 385 aaPredicted RBP4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 MRPL36Q9P0J6 103 aaKnown RBP4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.71
PCDH11X-202ENST00000361655 ATRQ13535 2644 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms