RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MEIG1Q5JSS6 88 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 CDX4O14627 284 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV1-5P01602 117 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 IL11RAQ14626 422 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 ACP7Q6ZNF0 438 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 TRAV24A0A0B4J272 114 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 D6R8Y8 96 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 COQ2Q96H96 371 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 NPIPB6E9PJ23 425 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 KHDC1LQ5JSQ8 128 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 COL18A1P39060 1754 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 SMIM27A0A1W2PRY6 76 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 TOMM40O96008 361 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 LGALS7P47929 136 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF138P52744 262 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF726P1Q15940 193 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 OR10J6PQ8NGY7 276 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 OVOL2Q9BRP0 275 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 INSIG2Q9Y5U4 225 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 CGB1A6NKQ9 187 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 IFNL4K9M1U5 179 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 SRSF1Q07955 248 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS13B-203ENST00000358544 FAM74A4Q5TZK3 123 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF292O60281 2723 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 M0R2P5 195 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 IL18BPO95998 194 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 MFAP4P55083 255 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 GAGE5Q13069 117 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 GAGE6Q13070 117 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 ABHD17AQ96GS6 310 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 JMJD8Q96S16 334 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 RSPO4Q2I0M5 234 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-203ENST00000358544 IDI2-AS1Q9NZ38 188 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 WFDC12Q8WWY7 111 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 RAB1CQ92928 201 aa5.05□□□□□ -1.6
VPS13B-203ENST00000358544 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 CCL11P51671 97 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 SCRT1Q9BWW7 348 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 IGLC7A0M8Q6 106 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF562Q6V9R5 426 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 DCTN5Q9BTE1 182 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 COL16A1Q07092 1604 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 J3KT08 172 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 AGFG2O95081 481 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 COL9A1P20849 921 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 RRN3P1Q2M238 152 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF441Q8N8Z8 693 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 PYGO2Q9BRQ0 406 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 F2RL2O00254 374 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 CEACAM3P40198 252 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 RCHY1Q96PM5 261 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 TRBV20-1A0A075B6N2 111 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 H7C1H1 209 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 SLAQ13239 276 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF114Q8NC26 417 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 GFRA4Q9GZZ7 299 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 SS18L1O75177 396 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 CCDC144NLQ6NUI1 221 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 SLC25A39Q9BZJ4 359 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV3D-11A0A0A0MRZ8 115 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 C15orf62A8K5M9 175 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 Q86TA4 180 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ITLN1Q8WWA0 313 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 FSCN3Q9NQT6 498 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 F2Z2F3 143 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 RHOGP84095 191 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 GAGE2AQ6NT46 116 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF329Q86UD4 541 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 PNRC2Q9NPJ4 139 aaKnown RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 AHDC1Q5TGY3 1603 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 MNX1P50219 401 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-203ENST00000358544 LEAP2Q969E1 77 aa5.04□□□□□ -1.6
VPS13B-203ENST00000358544 TCRAP04437 139 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
VPS13B-203ENST00000358544 TAL2Q16559 108 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CDCP2Q5VXM1 449 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF497Q6ZNH5 498 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 EDA2RQ9HAV5 297 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV1-12A0A0C4DH73 117 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 NCR2O95944 276 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV1D-12P01611 117 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 OR9G1Q8NH87 305 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CT55Q8WUE5 264 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 PLA2G2FQ9BZM2 168 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 C9JAW5 83 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 ZNF688P0C7X2 276 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 IFI27P40305 119 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-203ENST00000358544 PPP1R32Q7Z5V6 425 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 OSR1Q8TAX0 266 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-203ENST00000358544 TRAV26-1A0A087WT03 109 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 RNF115Q9Y4L5 304 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 IGKV3-11P04433 115 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 SCARF2Q96GP6 870 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-203ENST00000358544 VGLL1Q99990 258 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 PTGDSP41222 190 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CEP192Q8TEP8 1941 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms