RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GFI1Q99684 422 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 RNF5Q99942 180 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 LY96Q9Y6Y9 160 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 E9PLN8 166 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 RPL35AP18077 110 aaKnown RBP12.22□□□□□ -0.45
LMX1B-201ENST00000355497 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 CRYGSP22914 178 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 RSPO3Q9BXY4 272 aaPredicted RBP12.22□□□□□ -0.45
LMX1B-201ENST00000355497 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
LMX1B-201ENST00000355497 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 ATG2BQ96BY7 2078 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 SS18Q15532 418 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 SYS1-DBNDD2H3BUS1 97 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 ZNF672Q499Z4 452 aaPredicted RBP12.21□□□□□ -0.45
LMX1B-201ENST00000355497 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.45
LMX1B-201ENST00000355497 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 IGKV1D-12P01611 117 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 KLRD1Q13241 179 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 PINLYPA6NC86 204 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 C3orf79P0CE67 100 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 NDPQ00604 133 aa12.21□□□□□ -0.46
LMX1B-201ENST00000355497 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.46
LMX1B-201ENST00000355497 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 FCN3O75636 299 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 LCN12Q6JVE5 192 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 C14orf178Q8N769 122 aaPredicted RBP12.2□□□□□ -0.46
LMX1B-201ENST00000355497 MPV17L2Q567V2 206 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 FOXF2Q12947 444 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 BMPERQ8N8U9 685 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 Q8TAT8 98 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 SRRM5B3KS81 715 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 CHAC1Q9BUX1 264 aa12.2□□□□□ -0.46
LMX1B-201ENST00000355497 MRPL52Q86TS9 123 aaKnown RBP12.19□□□□□ -0.46
LMX1B-201ENST00000355497 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 HGFACQ04756 655 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 SNHG12Q9BXW3 62 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 EFNA4P52798 201 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
LMX1B-201ENST00000355497 LTBP4Q8N2S1 1624 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 GLRX5Q86SX6 157 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 FAM223AQ8IWN6 122 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 ZNF114Q8NC26 417 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 TRAV3A0A0B4J244 114 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 H0YJW9 148 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 UBE2V1Q13404 147 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 SPXQ9BT56 116 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 C1QTNF4Q9BXJ3 329 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 CD177Q8N6Q3 437 aa12.18□□□□□ -0.46
LMX1B-201ENST00000355497 H3BMM0 161 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 C9JAW5 83 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 ANKRD36A6QL64 1941 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 KNL1Q8NG31 2342 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 SOCS3O14543 225 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 RPP25LQ8N5L8 163 aaKnown RBP12.17□□□□□ -0.46
LMX1B-201ENST00000355497 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
LMX1B-201ENST00000355497 CEACAM8P31997 349 aaPredicted RBP12.16□□□□□ -0.46
LMX1B-201ENST00000355497 IGKV1-27A0A075B6S5 117 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 A0A087WWL8 130 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 SELLP14151 372 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
LMX1B-201ENST00000355497 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 NMSQ5H8A3 153 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 TMEM126AQ9H061 195 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 M0R1W7 72 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
LMX1B-201ENST00000355497 CD5LO43866 347 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 CFHR1Q03591 330 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 IGFL4Q6B9Z1 124 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 H3BUX3 64 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 NEGR1Q7Z3B1 354 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 IL18BPO95998 194 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 CT83Q5H943 113 aa12.15□□□□□ -0.46
LMX1B-201ENST00000355497 RNF166Q96A37 237 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms