RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 WASHC3Q9Y3C0 194 aa17.03■□□□□ 0.32
PTPN18-202ENST00000347849 FSTL3O95633 263 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 LDLRAD2Q5SZI1 272 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 PDPNQ86YL7 162 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 OR8B3Q8NGG8 313 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 OR8B2Q96RD0 313 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 VPS13CQ709C8 3753 aa17.02■□□□□ 0.32
PTPN18-202ENST00000347849 M0R2Z0 102 aa17.02■□□□□ 0.31
PTPN18-202ENST00000347849 ENSAO43768 121 aaKnown RBP17.02■□□□□ 0.31
PTPN18-202ENST00000347849 CNTFRP26992 372 aa17.02■□□□□ 0.31
PTPN18-202ENST00000347849 CAMPP49913 170 aa17.02■□□□□ 0.31
PTPN18-202ENST00000347849 SSBP2P81877 361 aaPredicted RBP17.02■□□□□ 0.31
PTPN18-202ENST00000347849 MRGPRG-AS1Q2M3A8 158 aa17.02■□□□□ 0.31
PTPN18-202ENST00000347849 EBLN2Q6P2I7 272 aa17.02■□□□□ 0.31
PTPN18-202ENST00000347849 SLC25A17O43808 307 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 PTTG1IPP53801 180 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 PMCHL1Q16048 86 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 FAM71F2Q6NXP2 309 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 OR1L8Q8NGR8 309 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 MBD6Q96DN6 1003 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 ZNF430Q9H8G1 570 aaPredicted RBP17.01■□□□□ 0.31
PTPN18-202ENST00000347849 NDUFA4L2Q9NRX3 87 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 ONECUT1Q9UBC0 465 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 PSMB11A5LHX3 300 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 FAM181BA6NEQ2 426 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 CCL25O15444 150 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 IGHV3-48P01763 117 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 PCP4P48539 62 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 RNASEKQ6P5S7 137 aaKnown RBP17.01■□□□□ 0.31
PTPN18-202ENST00000347849 DTX2Q86UW9 622 aa17.01■□□□□ 0.31
PTPN18-202ENST00000347849 WIPF2Q8TF74 440 aaPredicted RBP17.01■□□□□ 0.31
PTPN18-202ENST00000347849 MRPL32Q9BYC8 188 aaKnown RBP17.01■□□□□ 0.31
PTPN18-202ENST00000347849 UNQ5815/PRO19632Q6UWF5 114 aa17■□□□□ 0.31
PTPN18-202ENST00000347849 OR5B3Q8NH48 314 aa17■□□□□ 0.31
PTPN18-202ENST00000347849 GRAMD2BQ96HH9 432 aa17■□□□□ 0.31
PTPN18-202ENST00000347849 BUB1B-PAK6H3BSN5 160 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 ARF6P62330 175 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 TMEM167AQ8TBQ9 72 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 SGK494Q96LW2 274 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 TNFRSF19Q9NS68 423 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 MED13LQ71F56 2210 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 RASL11AQ6T310 242 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 ZNF329Q86UD4 541 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 C8orf46Q8TAG6 207 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 PAXXQ9BUH6 204 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 UBTD1Q9HAC8 227 aa16.99■□□□□ 0.31
PTPN18-202ENST00000347849 A0A1W2PN81 502 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 CORTO00230 105 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 WT1-ASQ06250 92 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 LY6G5BQ8NDX9 201 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 ORAOV1Q8WV07 137 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 ALKBH7Q9BT30 221 aaPredicted RBP16.98■□□□□ 0.31
PTPN18-202ENST00000347849 MRPS16Q9Y3D3 137 aaKnown RBP16.98■□□□□ 0.31
PTPN18-202ENST00000347849 NAV3Q8IVL0 2385 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 TRAV9-2A0A087WT02 112 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 HIGD1CA8MV81 97 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 PEX7O00628 323 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 COX7A2P2O60397 106 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 ATP5IP56385 69 aaPredicted RBP16.98■□□□□ 0.31
PTPN18-202ENST00000347849 FAM231DQ6ZW35 169 aa16.98■□□□□ 0.31
PTPN18-202ENST00000347849 IGLL1P15814 213 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 ERHP84090 104 aaKnown RBP16.97■□□□□ 0.31
PTPN18-202ENST00000347849 C10orf113Q5VZT2 155 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 KIR3DL3Q8N743 410 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 NEU4Q8WWR8 484 aaPredicted RBP16.97■□□□□ 0.31
PTPN18-202ENST00000347849 IGHV1-3A0A0C4DH29 117 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 GNG5P63218 68 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 PATE2Q6UY27 113 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 CACNG8Q8WXS5 425 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 TIMD4Q96H15 378 aa16.97■□□□□ 0.31
PTPN18-202ENST00000347849 VWC2LB2RUY7 222 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 NPIPB3Q92617 1050 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 FLNCQ14315 2725 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 LIPFP07098 398 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 UBE2G1P62253 170 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 KLRD1Q13241 179 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 KLF5Q13887 457 aaPredicted RBP16.96■□□□□ 0.31
PTPN18-202ENST00000347849 INSIG2Q9Y5U4 225 aa16.96■□□□□ 0.31
PTPN18-202ENST00000347849 C2orf70A6NJV1 201 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 APELAP0DMC3 54 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 MC5RP33032 325 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 OR2D3Q8NGH3 330 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 SPATA12Q7Z6I5 190 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 TNFRSF14Q92956 283 aa16.95■□□□□ 0.3
PTPN18-202ENST00000347849 LHFPL4Q7Z7J7 247 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 FNDC4Q9H6D8 234 aaPredicted RBP16.94■□□□□ 0.3
PTPN18-202ENST00000347849 CLEC5AQ9NY25 188 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 A0A1W2PRD5 423 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 A0A1W2PRF3 423 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 A0A1W2PRM7 423 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 HIST1H1EP10412 219 aaKnown RBP16.94■□□□□ 0.3
PTPN18-202ENST00000347849 VSTM2AQ8TAG5 236 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 COX11Q9Y6N1 276 aa16.94■□□□□ 0.3
PTPN18-202ENST00000347849 A0A1W2PPI3 338 aa16.93■□□□□ 0.3
PTPN18-202ENST00000347849 SH2D7A6NKC9 451 aaPredicted RBP16.93■□□□□ 0.3
PTPN18-202ENST00000347849 LY6LH3BQJ8 138 aa16.93■□□□□ 0.3
PTPN18-202ENST00000347849 CD24P25063 80 aa16.93■□□□□ 0.3
PTPN18-202ENST00000347849 TCF24Q7RTU0 167 aa16.93■□□□□ 0.3
PTPN18-202ENST00000347849 ZNF738Q8NE65 137 aa16.93■□□□□ 0.3
PTPN18-202ENST00000347849 RNASE8Q8TDE3 154 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms