RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 EEF1AKMT3Q96AZ1 226 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 OR51M1Q9H341 326 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 YAE1D1Q9NRH1 226 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 H3BUA1 57 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 ATP5G2Q06055 141 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 BTN1A1Q13410 526 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 C20orf24Q9BUV8 137 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 ZNF702PQ9H963 129 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 TRBV7-1A0A0A6YYK4 115 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 GP9P14770 177 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 TPPP2P59282 170 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 AWAT1Q58HT5 328 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 LCNL1Q6ZST4 164 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 Q8WTZ3 238 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
VRK2-201ENST00000340157 IGHV3-35A0A0C4DH35 117 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 GGTLC3B5MD39 225 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 H3BRN7 92 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 NUPL2O15504 423 aaKnown RBP16.42■□□□□ 0.22
VRK2-201ENST00000340157 SNRPCP09234 159 aaKnown RBP16.42■□□□□ 0.22
VRK2-201ENST00000340157 FAM74A3Q4VXF1 159 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 RPUSD4Q96CM3 377 aaKnown RBP16.42■□□□□ 0.22
VRK2-201ENST00000340157 TXNDC17Q9BRA2 123 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 SHANK2-AS3Q9BTD1 123 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 PARLQ9H300 379 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 PDE6DO43924 150 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 SRP14P37108 136 aaKnown RBP16.42■□□□□ 0.22
VRK2-201ENST00000340157 ZNF343Q6P1L6 599 aa16.42■□□□□ 0.22
VRK2-201ENST00000340157 SCO2A0A1W2PP80 73 aa16.41■□□□□ 0.22
VRK2-201ENST00000340157 DNASE2O00115 360 aaPredicted RBP16.41■□□□□ 0.22
VRK2-201ENST00000340157 ZNF329Q86UD4 541 aa16.41■□□□□ 0.22
VRK2-201ENST00000340157 SMR3AQ99954 134 aa16.41■□□□□ 0.22
VRK2-201ENST00000340157 TGOLN2O43493 480 aa16.4■□□□□ 0.22
VRK2-201ENST00000340157 C10orf99Q6UWK7 81 aa16.4■□□□□ 0.22
VRK2-201ENST00000340157 NIPSNAP3BQ9BS92 247 aa16.4■□□□□ 0.22
VRK2-201ENST00000340157 DERL1Q9BUN8 251 aa16.4■□□□□ 0.22
VRK2-201ENST00000340157 ZFAND3Q9H8U3 227 aa16.4■□□□□ 0.22
VRK2-201ENST00000340157 ZNF727A8MUV8 499 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 F6UZH7 168 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 M0R036 132 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 PF4V1P10720 104 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 AKR1C3P42330 323 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 ZNF674Q2M3X9 581 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 ZNF600Q6ZNG1 722 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 STXBP6Q8NFX7 210 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 SMIM7Q9BQ49 75 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 PRSS22Q9GZN4 317 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 NPFFR1Q9GZQ6 430 aa16.39■□□□□ 0.22
VRK2-201ENST00000340157 IGHV3OR16-8A0A075B7F1 116 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 A0A1W2PRE2 83 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 C7orf77A4D0Y5 90 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 PPP5D1E7EU14 171 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 SCGB2A1O75556 95 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 NDUFB4O95168 129 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 TMEM88Q6PEY1 159 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 TOMM20LQ6UXN7 152 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 ATP6V0BQ99437 205 aa16.39■□□□□ 0.21
VRK2-201ENST00000340157 GAR1Q9NY12 217 aaKnown RBP16.39■□□□□ 0.21
VRK2-201ENST00000340157 TRBV12-3P01733 135 aa16.38■□□□□ 0.21
VRK2-201ENST00000340157 IGHG4P01861 327 aa16.38■□□□□ 0.21
VRK2-201ENST00000340157 CBLN2Q8IUK8 224 aa16.38■□□□□ 0.21
VRK2-201ENST00000340157 C11orf52Q96A22 123 aa16.38■□□□□ 0.21
VRK2-201ENST00000340157 PSMB8P28062 276 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 RAB9AP51151 201 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 TMEM86BQ8N661 226 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 TVP23CQ96ET8 276 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 USMG5Q96IX5 58 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 GNB4Q9HAV0 340 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 SDF2L1Q9HCN8 221 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 TMEM14CQ9P0S9 112 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 ZNF98A6NK75 572 aa16.37■□□□□ 0.21
VRK2-201ENST00000340157 MRPS12O15235 138 aaKnown RBP16.37■□□□□ 0.21
VRK2-201ENST00000340157 MTORP42345 2549 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 DNAJC9-AS1A6NH13 148 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 IGHV3-11P01762 117 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 NBEAP1P0C6P0 100 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 MYCNOSP40205 109 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 SUMO1P63165 101 aaKnown RBP16.36■□□□□ 0.21
VRK2-201ENST00000340157 Q8N2B8 174 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 BLNKQ8WV28 456 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 ELOVL1Q9BW60 279 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 ESM1Q9NQ30 184 aa16.36■□□□□ 0.21
VRK2-201ENST00000340157 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.35■□□□□ 0.21
VRK2-201ENST00000340157 CLPSL1A2RUU4 121 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 H3BTX0 84 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 RPS10P5Q9NQ39 176 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 ZNF586Q9NXT0 402 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 TRBV20OR9-2A0A075B6H5 130 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 RHEBQ15382 184 aa16.35■□□□□ 0.21
VRK2-201ENST00000340157 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.35■□□□□ 0.21
VRK2-201ENST00000340157 IGLC2P0DOY2 106 aa16.34■□□□□ 0.21
VRK2-201ENST00000340157 CRYBB3P26998 211 aa16.34■□□□□ 0.21
VRK2-201ENST00000340157 NAT8Q9UHE5 227 aa16.34■□□□□ 0.21
VRK2-201ENST00000340157 RABAC1Q9UI14 185 aa16.34■□□□□ 0.21
VRK2-201ENST00000340157 BMPR1BO00238 502 aa16.33■□□□□ 0.21
VRK2-201ENST00000340157 ARL3P36405 182 aa16.33■□□□□ 0.21
VRK2-201ENST00000340157 RANP62826 216 aaKnown RBP16.33■□□□□ 0.21
VRK2-201ENST00000340157 TMEM241Q24JQ0 296 aa16.33■□□□□ 0.21
VRK2-201ENST00000340157 NF1P21359 2839 aa16.33■□□□□ 0.21
VRK2-201ENST00000340157 HIST1H1EP10412 219 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms