RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 V9GYV3 84 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 ELOA3CA0A087WX78 387 aaPredicted RBP18.27■□□□□ 0.52
CLPTM1-201ENST00000337392 C19orf24Q9BVV8 132 aa18.27■□□□□ 0.52
CLPTM1-201ENST00000337392 A0A1W2PRE2 83 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 M0R1W7 72 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 IGKV1-17P01599 117 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 PRB1P04280 392 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 RPL15P61313 204 aaKnown RBP18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 CX3CL1P78423 397 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 HIST1H2BLQ99880 126 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 SERTAD4Q9NUC0 356 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 TRAPPC1Q9Y5R8 145 aa18.27■□□□□ 0.51
CLPTM1-201ENST00000337392 PTPN13Q12923 2485 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 IGHV3-35A0A0C4DH35 117 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 IGF2BP2-AS1Q96M15 143 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 C9JCJ5 164 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 SELENOTP62341 195 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 C5orf64Q2M2E5 130 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 PVRIGQ6DKI7 326 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 ETFRF1Q6IPR1 90 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 C22orf15Q8WYQ4 148 aa18.26■□□□□ 0.51
CLPTM1-201ENST00000337392 CD99P14209 185 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 NRGNQ92686 78 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 C17orf77Q96MU5 243 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 TRGV9Q99603 122 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 ZNF469Q96JG9 3925 aaPredicted RBP18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 NUPR1O60356 82 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 HYPMO75409 117 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 GZMBP10144 247 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 EFNA4P52798 201 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 CUBNO60494 3623 aa18.25■□□□□ 0.51
CLPTM1-201ENST00000337392 PGPA6NDG6 321 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 ADMP35318 185 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 CEACAM3P40198 252 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 PAX2Q02962 417 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 TBX15Q96SF7 602 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 SIRPDQ9H106 197 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 IGHV4-39P01824 125 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 LMO4P61968 165 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 FOXL1Q12952 345 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 RASL11BQ9BPW5 248 aa18.24■□□□□ 0.51
CLPTM1-201ENST00000337392 TRAV8-1A0A0A6YYK1 113 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 IER3P46695 156 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 TMEM256Q8N2U0 113 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 IL36BQ9NZH7 164 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 SLC25A5P05141 298 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 JOSD1Q15040 202 aaPredicted RBP18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 EXOC3-AS1Q8N2X6 119 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 PERPQ96FX8 193 aa18.23■□□□□ 0.51
CLPTM1-201ENST00000337392 PEX7O00628 323 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 NDUFA3O95167 84 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 TYMSP04818 313 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 NBEAP1P0C6P0 100 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 GP9P14770 177 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 SOX21Q9Y651 276 aaPredicted RBP18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 ANKRD17O75179 2603 aaKnown RBP18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 CORTO00230 105 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 AJUBAQ96IF1 538 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 HSPB9Q9BQS6 159 aa18.22■□□□□ 0.51
CLPTM1-201ENST00000337392 SAA4P35542 130 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 IBA57Q5T440 356 aaKnown RBP18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 PIP4P2Q8N4L2 257 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 FANCD2OSQ96PS1 177 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 PITPNC1Q9UKF7 332 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 LINC01548A6NM66 108 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 AMBPP02760 352 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 TMEM11P17152 192 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 KIAA1644Q3SXP7 199 aa18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 MRPL54Q6P161 138 aaKnown RBP18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 MRPL41Q8IXM3 137 aaKnown RBP18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 SLC25A39Q9BZJ4 359 aaPredicted RBP18.21■□□□□ 0.51
CLPTM1-201ENST00000337392 F2Z2F3 143 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 NPBQ8NG41 125 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 IGHV2-70DA0A0C4DH43 119 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 LINC00614P0C842 121 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 TMEM183AQ8IXX5 376 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 ARPC1AQ92747 370 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 HIGD1AQ9Y241 93 aa18.2■□□□□ 0.5
CLPTM1-201ENST00000337392 OR2J3O76001 311 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 GAGE1Q13065 139 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 RPEL1Q2QD12 228 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 BAGE2Q86Y30 109 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 RNF2Q99496 336 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 MXRA5Q9NR99 2828 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 IL4P05112 153 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 OR1L6Q8NGR2 347 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 ZNF586Q9NXT0 402 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 CD33P20138 364 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 SAPCD1Q5SSQ6 148 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 DMRTA1Q5VZB9 504 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 LINC00322Q6ZN03 302 aaPredicted RBP18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 ARL2-SNX15V9GYD0 113 aa18.19■□□□□ 0.5
CLPTM1-201ENST00000337392 ZNF705GA8MUZ8 300 aaPredicted RBP18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 M0R143 59 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 TGOLN2O43493 480 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 GCGP01275 180 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 MYCNOSP40205 109 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 CNN1P51911 297 aaKnown RBP18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 BRD3OSQ6XYD6 125 aa18.18■□□□□ 0.5
CLPTM1-201ENST00000337392 TMEM219Q86XT9 240 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms