RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 C7orf69Q9H7B7 122 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 KLF12Q9Y4X4 402 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 HIGD1CA8MV81 97 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 AMTP48728 403 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 ZNF586Q9NXT0 402 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 DPM3Q9P2X0 92 aa14.07□□□□□ -0.16
LRCH3-201ENST00000334859 TBL2Q9Y4P3 447 aaKnown RBP14.07□□□□□ -0.16
LRCH3-201ENST00000334859 KIR2DL5BA0A0G2JN68 375 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 KIR2DL5BA0A0G2JPC4 375 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 A0A1W2PRD5 423 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 A0A1W2PRF3 423 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 A0A1W2PRM7 423 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 UCNP55089 124 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 KIR2DL5AQ8N109 375 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 VN1R17PQ8TDU5 208 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 TSKUQ8WUA8 353 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 FMC1Q96HJ9 113 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 SLC25A39Q9BZJ4 359 aaPredicted RBP14.06□□□□□ -0.16
LRCH3-201ENST00000334859 NBR2O15453 112 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 TOX4O94842 621 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 TCRAP04437 139 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 KRTDAPP60985 99 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 HES1Q14469 280 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
LRCH3-201ENST00000334859 CBLN4Q9NTU7 201 aa14.06□□□□□ -0.16
LRCH3-201ENST00000334859 GPX1P07203 203 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 CEACAM3P40198 252 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 CAMPP49913 170 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 RASL11AQ6T310 242 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 SMIM12Q96EX1 92 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 FBXL7Q9UJT9 491 aa14.05□□□□□ -0.16
LRCH3-201ENST00000334859 TOMM40O96008 361 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 IGKV1-17P01599 117 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 COL6A6A6NMZ7 2263 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 LOC105371242A0A075B767 164 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 A0A1W2PS18 150 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 OR11H6Q8NGC7 330 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
LRCH3-201ENST00000334859 RPP21Q9H633 154 aaKnown RBP14.04□□□□□ -0.16
LRCH3-201ENST00000334859 RNF114Q9Y508 228 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 SPTBN4Q9H254 2564 aa14.04□□□□□ -0.16
LRCH3-201ENST00000334859 K7EIM0 57 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 LTAP01374 205 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 MLST8Q9BVC4 326 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 SSBP4Q9BWG4 385 aaPredicted RBP14.03□□□□□ -0.16
LRCH3-201ENST00000334859 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 P01737 135 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 TDRG1Q3Y452 100 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 TEX43Q6ZNM6 134 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 TCF24Q7RTU0 167 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 CFHR4Q92496 578 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 RBM14Q96PK6 669 aaKnown RBP14.03□□□□□ -0.16
LRCH3-201ENST00000334859 NRN1Q9NPD7 142 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 OTORQ9NRC9 128 aa14.03□□□□□ -0.16
LRCH3-201ENST00000334859 SPTBN1Q01082 2364 aaKnown RBP14.02□□□□□ -0.16
LRCH3-201ENST00000334859 EREGO14944 169 aa14.02□□□□□ -0.16
LRCH3-201ENST00000334859 ZNF324O75467 553 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-201ENST00000334859 LBHQ53QV2 105 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-201ENST00000334859 KLF17Q5JT82 389 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-201ENST00000334859 LINC00322Q6ZN03 302 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-201ENST00000334859 VAMP8Q9BV40 100 aa14.02□□□□□ -0.16
LRCH3-201ENST00000334859 PAM16Q9Y3D7 125 aa14.02□□□□□ -0.16
LRCH3-201ENST00000334859 S4R3C0 116 aa14.02□□□□□ -0.16
LRCH3-201ENST00000334859 C18orf32Q8TCD1 76 aa14.02□□□□□ -0.17
LRCH3-201ENST00000334859 C2orf88Q9BSF0 95 aa14.02□□□□□ -0.17
LRCH3-201ENST00000334859 TMEM14CQ9P0S9 112 aa14.02□□□□□ -0.17
LRCH3-201ENST00000334859 M0R1W7 72 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 NTF3P20783 257 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 GPR6P46095 362 aaPredicted RBP14.01□□□□□ -0.17
LRCH3-201ENST00000334859 PRR31Q5SQ13 230 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 C11orf71Q6IPW1 123 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 GOLT1AQ6ZVE7 132 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 Q86TA4 180 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 FAM19A2Q8N3H0 131 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 OR2D3Q8NGH3 330 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 DAZAP1Q96EP5 407 aaKnown RBP14.01□□□□□ -0.17
LRCH3-201ENST00000334859 A6NNC1 897 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 VWC2LB2RUY7 222 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 ATP5L2Q7Z4Y8 100 aa14.01□□□□□ -0.17
LRCH3-201ENST00000334859 MRPL27Q9P0M9 148 aaKnown RBP14.01□□□□□ -0.17
LRCH3-201ENST00000334859 A8MWL6 223 aa14□□□□□ -0.17
LRCH3-201ENST00000334859 ODF3BA8MYP8 253 aa14□□□□□ -0.17
LRCH3-201ENST00000334859 CHD8Q9HCK8 2581 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 DIRC3C9JPN6 131 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 NDUFA3O95167 84 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 IL4P05112 153 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 PRTN3P24158 256 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 C5orf64Q2M2E5 130 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 PRNTQ86SH4 94 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 BPIFA4PQ86YQ2 179 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 NPBQ8NG41 125 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 NEU4Q8WWR8 484 aaPredicted RBP13.99□□□□□ -0.17
LRCH3-201ENST00000334859 RNF125Q96EQ8 232 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 SHANK2-AS3Q9BTD1 123 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 ZNF492Q9P255 531 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 ASH1LQ9NR48 2969 aaKnown RBP13.99□□□□□ -0.17
LRCH3-201ENST00000334859 HBBP68871 147 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms