RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 S4R3C0 116 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 C7orf71A4D174 169 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 SRRM4A7MD48 611 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 RPL7P18124 248 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 TMEM200BQ69YZ2 307 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 RAB1BQ9H0U4 201 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 NCOR1P1Q9H4R4 102 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 ABCA4P78363 2273 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 EXPH5Q8NEV8 1989 aa10.34□□□□□ -0.75
DNMT3A-202ENST00000321117 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 A0A087X0K7 114 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 OR2T8A6NH00 312 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 TOMM40O96008 361 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 IGLV1-44P01699 117 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 PRB3Q04118 309 aaPredicted RBP10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 BSPH1Q075Z2 132 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 FAM90A27PA6NNH2 459 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 PSG1P11464 419 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 FAM169BQ8N8A8 192 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 PSG9Q00887 426 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 TMEM133Q9H2Q1 129 aa10.33□□□□□ -0.76
DNMT3A-202ENST00000321117 CEP192Q8TEP8 1941 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 H3BUT2 72 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 PROP1O75360 226 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 A0A1W2PPI3 338 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 CD24P25063 80 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 SP5Q6BEB4 398 aaPredicted RBP10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 Q6ZVH6 145 aa10.32□□□□□ -0.76
DNMT3A-202ENST00000321117 ZNF207O43670 478 aaKnown RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 ZNF474Q6S9Z5 364 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 HCFC1P51610 2035 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 CACNG7P62955 275 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 SEC11AP67812 179 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 WT1-ASQ06250 92 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 TM4SF20Q53R12 229 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 DDB2Q92466 427 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 SLC25A39Q9BZJ4 359 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 MBD3L4A6NDZ8 208 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 MBD3L3A6NE82 208 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 MBD3L5A6NJ08 208 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 MBD3L2Q8NHZ7 208 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 MED13LQ71F56 2210 aa10.31□□□□□ -0.76
DNMT3A-202ENST00000321117 SRSF6Q13247 344 aaKnown RBP10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 RNF125Q96EQ8 232 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 C1RLQ9NZP8 487 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 GOSR1O95249 250 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 EIF4EBP1Q13541 118 aaPredicted RBP10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 SPANXN1Q5VSR9 72 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 GATA4P43694 442 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 CT83Q5H943 113 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 HBDP02042 147 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 Q86TA4 180 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 ZNF492Q9P255 531 aa10.3□□□□□ -0.76
DNMT3A-202ENST00000321117 GFRA4Q9GZZ7 299 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 SPCS1Q9Y6A9 102 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 LAMA2P24043 3122 aaKnown RBP10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 IGKV1OR2-108A0A075B7D4 117 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 IGHV1-24A0A0C4DH33 117 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 PVRIGQ6DKI7 326 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 ZNF833PQ6ZTB9 187 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 FER1L6-AS1Q8NA97 138 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 ECSCRQ19T08 205 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 FAM57AQ8TBR7 257 aa10.29□□□□□ -0.76
DNMT3A-202ENST00000321117 CD5LO43866 347 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 IGHV1-8P0DP01 117 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 SSBP2P81877 361 aaPredicted RBP10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 SPTAN1Q13813 2472 aaKnown RBP10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 TMEM178BH3BS89 294 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 J3KRW8 73 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 CCL25O15444 150 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 TMEM78Q5T7P6 136 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 IGF2BP2-AS1Q96M15 143 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 SELENOKQ9Y6D0 94 aa10.28□□□□□ -0.76
DNMT3A-202ENST00000321117 D6R8Y8 96 aa10.27□□□□□ -0.76
DNMT3A-202ENST00000321117 SMIM17P0DL12 118 aa10.27□□□□□ -0.76
DNMT3A-202ENST00000321117 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.76
DNMT3A-202ENST00000321117 GUSBP1Q15486 140 aa10.27□□□□□ -0.76
DNMT3A-202ENST00000321117 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.76
DNMT3A-202ENST00000321117 KIR3DL3Q8N743 410 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms