RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CLDN34H7C241 214 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 RNASE2P10153 161 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF841Q6ZN19 808 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 ST6GALNAC6Q969X2 333 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 DYSFO75923 2080 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 ATRXP46100 2492 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 FAM74A7A6NL05 159 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 MMP23AO75900 390 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 OTORQ9NRC9 128 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 PRR14LQ5THK1 2151 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 DEFB112Q30KQ8 113 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 LINC00527Q9UJ94 153 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 KIAA0141Q14154 515 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 MRPS16Q9Y3D3 137 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 C9JCJ5 164 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 PRSS1P07477 247 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 P0C879 139 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 C5orf24Q7Z6I8 188 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 C1QL4Q86Z23 238 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 NPBQ8NG41 125 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 S4R3C0 116 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 GCGP01275 180 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 IGKV1-16P04430 117 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 CAMPP49913 170 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 PAX9P55771 341 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 DLX1P56177 255 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 PMS2P11Q13670 270 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 RNASEKQ6P5S7 137 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 FMC1Q96HJ9 113 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF292O60281 2723 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 TRAV8-6A0A0B4J262 113 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 PRB3Q04118 309 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 ICAM4Q14773 271 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 NBEAP1P0C6P0 100 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 LMO4P61968 165 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 BSXQ3C1V8 233 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF329Q86UD4 541 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF114Q8NC26 417 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 CARHSP1Q9Y2V2 147 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV4-61A0A0C4DH41 118 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 OR5AL1P0C617 328 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 FOXE3Q13461 319 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 Q6ZPA2 131 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 FCN1O00602 326 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 MYCNOSP40205 109 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 EIF4EBP1Q13541 118 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
PDLIM5-201ENST00000317968 A0A1W2PRE2 83 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 RPL15P61313 204 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 VWC2Q2TAL6 325 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 CYB561D1Q8N8Q1 229 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 SIRPDQ9H106 197 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 CHD8Q9HCK8 2581 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 GCHFRP30047 84 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 FHITP49789 147 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 CACNG7P62955 275 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 GOLT1AQ6ZVE7 132 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 WFDC1Q9HC57 220 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 MALP21145 153 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 ELOBQ15370 118 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 WNK2Q9Y3S1 2297 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 C19orf84I3L1E1 186 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 IGLV2-14P01704 120 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 DAD1P61803 113 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 HIVEP3Q5T1R4 2406 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 NDUFB8O95169 186 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 INSL3P51460 131 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 GEMIN7Q9H840 131 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-201ENST00000317968 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 STAG3L3P0CL85 134 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 TCF23Q7RTU1 214 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 HSPB8Q9UJY1 196 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 AKAP6Q13023 2319 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 ODF3BA8MYP8 253 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 TMEM50AO95807 157 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 CD7P09564 240 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 Q6AWC8 147 aa6.84□□□□□ -1.31
PDLIM5-201ENST00000317968 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms