RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 OR1L4Q8NGR5 311 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 PPP1R14BQ96C90 147 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 GPR82Q96P67 336 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 NEURL2Q9BR09 285 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 HIGD1AQ9Y241 93 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 NOTCH1P46531 2555 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 BUB3O43684 328 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 ORM2P19652 201 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 B2MP61769 119 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 PRR20EP86478 221 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 PRR20CP86479 221 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 PRR20DP86480 221 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 PRR20BP86481 221 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 PRR20AP86496 221 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 TMEM61Q8N0U2 210 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 STPG3Q8N7X2 389 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 OR1B1Q8NGR6 318 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 ST8SIA2Q92186 375 aa13.51□□□□□ -0.25
SSSCA1-201ENST00000309328 BORCS7-ASMTA0A0B4J1R7 106 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 TRAV2A0A0B4J234 112 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 ARPC5O15511 151 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 GP9P14770 177 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 SAMD13Q5VXD3 122 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 C16orf54Q6UWD8 224 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 ST6GAL2Q96JF0 529 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 RNF2Q99496 336 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 ARL6Q9H0F7 186 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 SLC39A9Q9NUM3 307 aa13.5□□□□□ -0.25
SSSCA1-201ENST00000309328 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 A0A0D9SG52 128 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 OR4C46A6NHA9 309 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 COX7A2P2O60397 106 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 EDN2P20800 178 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 GATA2P23769 480 aaPredicted RBP13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 CMC4P56277 68 aaPredicted RBP13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 TMEM182Q6ZP80 229 aaPredicted RBP13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 SMIM3Q9BZL3 60 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
SSSCA1-201ENST00000309328 OR5G3P0C626 314 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 GUCA2BQ16661 112 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 FAM90A2PQ658T7 463 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 FAM110AQ9BQ89 295 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 SLC25A39Q9BZJ4 359 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 ARV1Q9H2C2 271 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 DNAJC4Q9NNZ3 241 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 TIMM9Q9Y5J7 89 aa13.48□□□□□ -0.25
SSSCA1-201ENST00000309328 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 ZNF98A6NK75 572 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 JTBO76095 146 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 GALR1P47211 349 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 RPL11P62913 178 aaKnown RBP13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 C10orf113Q5VZT2 155 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 MIC13Q5XKP0 118 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 SIGLEC15Q6ZMC9 328 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 OR8I2Q8N0Y5 310 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 HYLS1Q96M11 299 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 SHANK2-AS3Q9BTD1 123 aa13.47□□□□□ -0.25
SSSCA1-201ENST00000309328 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 ZNF785A8K8V0 405 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 SMLR1H3BR10 107 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 H3BRN7 92 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 C1QBP02746 253 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 RPL7P18124 248 aaKnown RBP13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 MEOX2P50222 304 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 GNPNAT1Q96EK6 184 aaPredicted RBP13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 SEPSECSQ9HD40 501 aaKnown RBP13.46□□□□□ -0.25
SSSCA1-201ENST00000309328 IGHV3-66A0A0C4DH42 116 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 DNASE2O00115 360 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 LINC00305Q7Z4B0 112 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 PSMG3Q9BT73 122 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 DOK5Q9P104 306 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 DNAH3Q8TD57 4116 aa13.45□□□□□ -0.26
SSSCA1-201ENST00000309328 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 EIF5AP63241 154 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 SERF2P84101 59 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 OR2G3Q8NGZ4 309 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
SSSCA1-201ENST00000309328 MBP02144 154 aa13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 C4BPBP20851 252 aa13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 CD81P60033 236 aa13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 TMEM37Q8WXS4 190 aa13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 PRR25Q96S07 402 aa13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
SSSCA1-201ENST00000309328 SLC25A22Q9H936 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms