RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GCNT2Q8N0V5 402 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 TPSG1Q9NRR2 321 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 ZNF355PQ9NSJ1 428 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 PPIAL4EA0A075B759 164 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 PPIAL4CA0A0B4J2A2 164 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 HIGD1CA8MV81 97 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 PPIAL4DF5H284 164 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 PPIAL4FP0DN26 164 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 COX8AP10176 69 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 TNFSF4P23510 183 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 CCL11P51671 97 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 TAS2R45P59539 299 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 GNG5P63218 68 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 SRSF6Q13247 344 aaKnown RBP4.3□□□□□ -1.72
VPS50-202ENST00000305866 MRPL54Q6P161 138 aaKnown RBP4.3□□□□□ -1.72
VPS50-202ENST00000305866 BOD1L2Q8IYS8 172 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 Q8NA96 180 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 STXBP6Q8NFX7 210 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 OR4C13Q8NGP0 309 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 ANK3Q12955 4377 aaKnown RBP4.3□□□□□ -1.72
VPS50-202ENST00000305866 CEP290O15078 2479 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 KNTC1P50748 2209 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 A0A1W2PPV4 95 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 G3V4G9 280 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 PSG1P11464 419 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 TNFRSF1AP19438 455 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 TCL1AP56279 114 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 TNFAIP6P98066 277 aaPredicted RBP4.29□□□□□ -1.72
VPS50-202ENST00000305866 PSG9Q00887 426 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 NPBQ8NG41 125 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 OR1L4Q8NGR5 311 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 SLC35D1Q9NTN3 355 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 HHLA3Q9XRX5 114 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 TRAV34A0A0B4J273 112 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 A0A0G2JNJ9 132 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 CD5LO43866 347 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 SPINK4O60575 86 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 FABP6P51161 128 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
VPS50-202ENST00000305866 EBI3Q14213 229 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 LDLRAD2Q5SZI1 272 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 PRSS57Q6UWY2 283 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 BAGE3Q86Y29 109 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 BAGE2Q86Y30 109 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 CHRDL1Q9BU40 450 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 PLEKHA3Q9HB20 300 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 GNG12Q9UBI6 72 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 Q9UFV3 132 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 RBM7Q9Y580 266 aaKnown RBP4.29□□□□□ -1.72
VPS50-202ENST00000305866 CACNA1DQ01668 2161 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 PLXNB1O43157 2135 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 IGHV3OR15-7A0A075B7D8 119 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 NDUFA3O95167 84 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 PMCHP20382 165 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 FAM201AQ5SY85 155 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 EPDR1Q9UM22 224 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 WASHC3Q9Y3C0 194 aa4.29□□□□□ -1.72
VPS50-202ENST00000305866 A0A1W2PPI3 338 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 ODF3BA8MYP8 253 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 RBPJQ06330 500 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 KIR3DS1Q14943 382 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 CRYBG3Q68DQ2 2970 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 ETFRF1Q6IPR1 90 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 Q86TA4 180 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 OR11H6Q8NGC7 330 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 CTSZQ9UBR2 303 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 SMPXQ9UHP9 88 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 CSMD2Q7Z408 3487 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 RNF223E7ERA6 249 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 FAM87AP0C7U9 286 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 TCF15Q12870 199 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 BCL6BQ8N143 479 aaPredicted RBP4.28□□□□□ -1.72
VPS50-202ENST00000305866 CNEP1R1Q8N9A8 125 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 ZNF738Q8NE65 137 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 TMEM70Q9BUB7 260 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 MRPL20Q9BYC9 149 aaKnown RBP4.28□□□□□ -1.72
VPS50-202ENST00000305866 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 OR4C46A6NHA9 309 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 I3L2K1 104 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 SAP30O75446 220 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 ACTL6BO94805 426 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 BRI3O95415 125 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 IGHV3-7P01780 117 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
VPS50-202ENST00000305866 TMEM108Q6UXF1 575 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 Q8N6K4 173 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 RNF185Q96GF1 192 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 SAP30LQ9HAJ7 183 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 FZR1Q9UM11 496 aa4.28□□□□□ -1.72
VPS50-202ENST00000305866 CUBNO60494 3623 aa4.27□□□□□ -1.73
VPS50-202ENST00000305866 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms