RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF431Q8TF32 576 aaPredicted RBP19.3■□□□□ 0.68
CDKN2A-201ENST00000304494 PMS2P5A8MQ11 134 aa19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 GIG44P09565 113 aaPredicted RBP19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 NUTF2P61970 127 aaKnown RBP19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 SAMD13Q5VXD3 122 aa19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 MZT2BQ6NZ67 158 aa19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 TMEM14EPQ6UXP3 125 aa19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 OR10P1Q8NGE3 313 aa19.29■□□□□ 0.68
CDKN2A-201ENST00000304494 FAM240BA0A1B0GVZ2 78 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 FNDC10F2Z333 226 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 ORM2P19652 201 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 C4BPBP20851 252 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 PSMB3P49720 205 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 DLK1P80370 383 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 TMEM147Q9BVK8 224 aa19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 RCL1Q9Y2P8 373 aaKnown RBP19.28■□□□□ 0.68
CDKN2A-201ENST00000304494 MBPP02686 304 aaPredicted RBP19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 H2AFB2P0C5Z0 115 aa19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 METTL15P1P0C7V9 234 aa19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 GATA2P23769 480 aaPredicted RBP19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 CEMP1Q6PRD7 247 aaPredicted RBP19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 CYP2G1PQ6ZSU1 146 aa19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 WDR12Q9GZL7 423 aaKnown RBP19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 MGAT4CQ9UBM8 478 aa19.27■□□□□ 0.68
CDKN2A-201ENST00000304494 H3BMM0 161 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 CCSO14618 274 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 IL5P05113 134 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 GALR1P47211 349 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 MEOX2P50222 304 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 SELENOTP62341 195 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 TMEM182Q6ZP80 229 aaPredicted RBP19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 OR1B1Q8NGR6 318 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 LINC00052Q96N35 136 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 SEC22CQ9BRL7 303 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 C1QTNF4Q9BXJ3 329 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 MFFQ9GZY8 342 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 SLC25A22Q9H936 323 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 NPVFQ9HCQ7 196 aa19.26■□□□□ 0.67
CDKN2A-201ENST00000304494 A6NHS1 94 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 ZNF98A6NK75 572 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 FAM25EA8MYX2 175 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 SOCS3O14543 225 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 HLA-DRB4P13762 266 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 RRAS2P62070 204 aaPredicted RBP19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 C12orf45Q8N5I9 185 aaPredicted RBP19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 C11orf45Q8TAV5 145 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 GPR82Q96P67 336 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 KLK5Q9Y337 293 aaPredicted RBP19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 HLA-DRB4X5D2U9 266 aa19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 PLECQ15149 4684 aaKnown RBP19.25■□□□□ 0.67
CDKN2A-201ENST00000304494 DNAH1Q9P2D7 4330 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 C7orf66A4D0T2 115 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 C5orf51A6NDU8 294 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 L7N2F9 121 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 ISLRO14498 428 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 CCNKO75909 580 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 VAMP2P63027 116 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 ASAH1Q13510 395 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 TBC1D24Q9ULP9 559 aa19.24■□□□□ 0.67
CDKN2A-201ENST00000304494 MIFP14174 115 aa19.23■□□□□ 0.67
CDKN2A-201ENST00000304494 GGACTQ9BVM4 153 aa19.23■□□□□ 0.67
CDKN2A-201ENST00000304494 SLC25A32Q9H2D1 315 aa19.23■□□□□ 0.67
CDKN2A-201ENST00000304494 ZNF705EA8MWA4 302 aaPredicted RBP19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 RAP2BP61225 183 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 TEPPQ6URK8 271 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 FOXI2Q6ZQN5 318 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 S100A7AQ86SG5 101 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 Q8NAQ8 132 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 CSNK1G2-AS1Q8NCQ2 148 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 PHLDA1Q8WV24 401 aaPredicted RBP19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 SAV1Q9H4B6 383 aaPredicted RBP19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 CLEC5AQ9NY25 188 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 PTTG2Q9NZH5 202 aa19.22■□□□□ 0.67
CDKN2A-201ENST00000304494 AGRNO00468 2067 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 K7EPK0 472 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 DEFB4AO15263 64 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 HYPMO75409 117 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 LINC00869P0C866 280 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 PLP1P60201 277 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 SPATA31B1PQ5VZV4 182 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 C16orf92Q96LL3 132 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 C2orf50Q96LR7 162 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 DOK5Q9P104 306 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 HIGD1AQ9Y241 93 aa19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 LSM5Q9Y4Y9 91 aaKnown RBP19.21■□□□□ 0.67
CDKN2A-201ENST00000304494 RSG1Q9BU20 258 aa19.2■□□□□ 0.66
CDKN2A-201ENST00000304494 SLC25A39Q9BZJ4 359 aaPredicted RBP19.2■□□□□ 0.66
CDKN2A-201ENST00000304494 HYDINQ4G0P3 5121 aa19.2■□□□□ 0.66
CDKN2A-201ENST00000304494 ALMS1Q8TCU4 4167 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 IGHV4-28A0A0C4DH34 117 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 H3BRN7 92 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 DEDDO75618 318 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 UPK1BO75841 260 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 NANOS2P60321 138 aaKnown RBP19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 GDF5OSQ5U4N7 250 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 GSG1LQ6UXU4 331 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 ENKURQ8TC29 256 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 CLUHP3Q96NS8 147 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 SHANK2-AS3Q9BTD1 123 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 SCRT1Q9BWW7 348 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms