RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TMEM54Q969K7 222 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 RHODO00212 210 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 OVOL1O14753 267 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 SAA2-SAA4A0A096LPE2 208 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 C2CD4DB7Z1M9 353 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 FOXF1Q12946 379 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 DUX4L9Q6RFH8 374 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-201ENST00000297405 SMRP1Q8NCR6 262 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 A0A096LPE4 126 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TRAV24A0A0B4J272 114 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 A0A1W2PPZ6 126 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 EFNB3Q15768 340 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 BHLHA9Q7RTU4 235 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 ELSPBP1Q96BH3 223 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 YPEL3P61236 119 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-201ENST00000297405 C1orf162Q8NEQ5 155 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-201ENST00000297405 SCO2A0A1W2PP80 73 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 AHRRA9YTQ3 701 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 K7ERS5 55 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 PF4P02776 101 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 A0A1B0GTL3 188 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 WISP3O95389 354 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-201ENST00000297405 C3AR1Q16581 482 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 DEFB115Q30KQ5 88 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 Q5BKY6 102 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 KLK15Q9H2R5 256 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 CDKN1AP38936 164 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 C15orf53Q8NAA6 179 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 C18orf32Q8TCD1 76 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 FOXA2Q9Y261 457 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-201ENST00000297405 WDR90Q96KV7 1748 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TRAV12-3A0A0B4J271 114 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 PILRAQ9UKJ1 303 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TRAV14DV4A0A0A6YYC5 116 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 SCTP09683 121 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 GFERP55789 205 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 ZNRF1Q8ND25 227 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 DPH3P1Q9H4G8 78 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 ZNF492Q9P255 531 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 HILPDAQ9Y5L2 63 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 BAHCC1Q9P281 2608 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TRAV41A0A0B4J266 112 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 A0A0B4J2C4 111 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 CELA2BP08218 269 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 UBE2AP49459 152 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 POLR3KQ9Y2Y1 108 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM213A2RRL7 107 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 GUSBP11Q6P575 273 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 ZNF524Q96C55 264 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 M0R1B8 84 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 NCR2O95944 276 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 CGAP01215 116 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 CDAP32320 146 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 ANXA2RQ3ZCQ2 193 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 ZC2HC1BQ5TFG8 222 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 C1QL3Q5VWW1 255 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 SPSB3Q6PJ21 355 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 RNF5Q99942 180 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 RNASE7Q9H1E1 156 aaKnown RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TNFRSF12AQ9NP84 129 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 LOXL2Q9Y4K0 774 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TNS1Q9HBL0 1735 aaKnown RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TMSB15BA0A087X1C1 80 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 A6NNC1 897 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 IGHG3P01860 377 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 RFESDQ8TAC1 157 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 FZR1Q9UM11 496 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 A0A1W2PNR3 127 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 LY6G6FQ5SQ64 297 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 RSPO2Q6UXX9 243 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 SLC25A28Q96A46 364 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 CLEC7AQ9BXN2 247 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 TRBV6-6A0A0A6YYG2 114 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 LILRA1O75019 489 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 PLAURQ03405 335 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 KLF5Q13887 457 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-201ENST00000297405 GFI1BQ5VTD9 330 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 NPIPB3Q92617 1050 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 COX14Q96I36 57 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 C20orf78Q9BR46 151 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 SS18L2Q9UHA2 77 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 IGHV3-7P01780 117 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 FGF6P10767 208 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
CSMD3-201ENST00000297405 HAX1O00165 279 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM202A6NGA9 273 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CXCL1P09341 107 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 RFNGQ9Y644 331 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 PAX4O43316 350 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 HLA-DRB4P13762 266 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CCL1P22362 96 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 UCNP55089 124 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms